Information for 2-CTCCGCCATTGTT (Motif 4)

A G T C C G A T A G T C A G T C A C T G A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T
Reverse Opposite:
C T G A C G T A G T A C C G T A C G T A A C G T A C T G A C T G A G T C C T A G C T A G G C T A A C T G
p-value:1e-15
log p-value:-3.627e+01
Information Content per bp:1.923
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.7 +/- 28.5bp
Average Position of motif in Background60.8 +/- 4.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:forward strand
Alignment:CTCCGCCATTGTT
GTCCGCCATTA--
 A G T C C G A T A G T C A G T C A C T G A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.75
Offset:5
Orientation:forward strand
Alignment:CTCCGCCATTGTT--
-----CCATTGTTYB
 A G T C C G A T A G T C A G T C A C T G A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.74
Offset:4
Orientation:forward strand
Alignment:CTCCGCCATTGTT-
----NCCATTGTTC
 A G T C C G A T A G T C A G T C A C T G A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

SOX9/MA0077.1/Jaspar

Match Rank:4
Score:0.73
Offset:5
Orientation:forward strand
Alignment:CTCCGCCATTGTT-
-----CCATTGTTC
 A G T C C G A T A G T C A G T C A C T G A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:5
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:CTCCGCCATTGTT-
----NCCATTGTTY
 A G T C C G A T A G T C A G T C A C T G A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T A C G T
A C G T A C G T A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T

Sox2/MA0143.3/Jaspar

Match Rank:6
Score:0.72
Offset:5
Orientation:forward strand
Alignment:CTCCGCCATTGTT
-----CCTTTGTT
 A G T C C G A T A G T C A G T C A C T G A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.70
Offset:5
Orientation:forward strand
Alignment:CTCCGCCATTGTT
-----CCWTTGTY
 A G T C C G A T A G T C A G T C A C T G A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Sox6/MA0515.1/Jaspar

Match Rank:8
Score:0.69
Offset:5
Orientation:forward strand
Alignment:CTCCGCCATTGTT--
-----CCATTGTTTT
 A G T C C G A T A G T C A G T C A C T G A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:9
Score:0.68
Offset:5
Orientation:forward strand
Alignment:CTCCGCCATTGTT--
-----CCATTGTTNY
 A G T C C G A T A G T C A G T C A C T G A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.68
Offset:5
Orientation:forward strand
Alignment:CTCCGCCATTGTT--
-----CCWTTGTYYB
 A G T C C G A T A G T C A G T C A C T G A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G