Information for 7-CCGCCATTTYSTG (Motif 14)

A T G C A G T C T A C G A G T C A G T C T C G A C G A T A C G T A G C T A G T C A T C G A C G T A C T G
Reverse Opposite:
A G T C T C G A A T G C T C A G C T G A T C G A C G T A A C G T A C T G C T A G A G T C C T A G A T C G
p-value:1e-9
log p-value:-2.183e+01
Information Content per bp:1.700
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif4.68%
Number of Background Sequences with motif139.4
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets50.8 +/- 28.7bp
Average Position of motif in Background54.1 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--CCGCCATTTYSTG
GTCCGCCATTA----
 A C G T A C G T A T G C A G T C T A C G A G T C A G T C T C G A C G A T A C G T A G C T A G T C A T C G A C G T A C T G
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CCGCCATTTYSTG
GCNGCCATCTTG--
 A C G T A T G C A G T C T A C G A G T C A G T C T C G A C G A T A C G T A G C T A G T C A T C G A C G T A C T G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:3
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CCGCCATTTYSTG
GCCGCCATCTTG--
 A C G T A T G C A G T C T A C G A G T C A G T C T C G A C G A T A C G T A G C T A G T C A T C G A C G T A C T G
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------CCGCCATTTYSTG
TACGCCCCGCCACTCTG--
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T A C G A G T C A G T C T C G A C G A T A C G T A G C T A G T C A T C G A C G T A C T G
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.65
Offset:5
Orientation:forward strand
Alignment:CCGCCATTTYSTG--
-----ATTTCCTGTN
 A T G C A G T C T A C G A G T C A G T C T C G A C G A T A C G T A G C T A G T C A T C G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CCGCCATTTYSTG----
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A T G C A G T C T A C G A G T C A G T C T C G A C G A T A C G T A G C T A G T C A T C G A C G T A C T G A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCGCCATTTYSTG----
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A T G C A G T C T A C G A G T C A G T C T C G A C G A T A C G T A G C T A G T C A T C G A C G T A C T G A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CCGCCATTTYSTG--
-----ATTTCCTGTN
 A T G C A G T C T A C G A G T C A G T C T C G A C G A T A C G T A G C T A G T C A T C G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CCGCCATTTYSTG--
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A T G C A G T C T A C G A G T C A G T C T C G A C G A T A C G T A G C T A G T C A T C G A C G T A C T G A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

E2F3/MA0469.2/Jaspar

Match Rank:10
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------CCGCCATTTYSTG
AAAAATGGCGCCATTTTT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T A C G A G T C A G T C T C G A C G A T A C G T A G C T A G T C A T C G A C G T A C T G
T C G A T C G A C G T A G C T A C G T A C A G T A T C G A C T G A T G C A C T G A T G C T A G C G T C A G C A T C G A T G C A T A G C T G A C T A C G T A C G T