Information for 2-ACAMAMGGTCACTTGC (Motif 3)

C G T A A T G C T G C A T G A C C T G A T G A C C T A G A T C G C G A T A G T C T C G A A G T C A C G T C G A T A C T G A G T C
Reverse Opposite:
A C T G T A G C C G T A G T C A C T A G A C G T C T A G C G T A A T G C A G T C A C T G A G C T A C T G A C G T A T C G C G A T
p-value:1e-15
log p-value:-3.644e+01
Information Content per bp:1.710
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif7.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.9 +/- 25.0bp
Average Position of motif in Background49.5 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0053.1_Rara_1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ACAMAMGGTCACTTGC
TCTCAAAGGTCACCTG-
 A C G T C G T A A T G C T G C A T G A C C T G A T G A C C T A G A T C G C G A T A G T C T C G A A G T C A C G T C G A T A C T G A G T C
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G A C G T

USF1/MA0093.2/Jaspar

Match Rank:2
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:ACAMAMGGTCACTTGC-
------GGTCACGTGGC
 C G T A A T G C T G C A T G A C C T G A T G A C C T A G A T C G C G A T A G T C T C G A A G T C A C G T C G A T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:forward strand
Alignment:ACAMAMGGTCACTTGC
----AAGGTCAC----
 C G T A A T G C T G C A T G A C C T G A T G A C C T A G A T C G C G A T A G T C T C G A A G T C A C G T C G A T A C T G A G T C
A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ACAMAMGGTCACTTGC
TCTCAAAGGTCACGAG-
 A C G T C G T A A T G C T G C A T G A C C T G A T G A C C T A G A T C G C G A T A G T C T C G A A G T C A C G T C G A T A C T G A G T C
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:ACAMAMGGTCACTTGC
--TCAAGGTCAN----
 C G T A A T G C T G C A T G A C C T G A T G A C C T A G A T C G C G A T A G T C T C G A A G T C A C G T C G A T A C T G A G T C
A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ACAMAMGGTCACTTGC
TATTCAAGGTCATGCGA
 A C G T C G T A A T G C T G C A T G A C C T G A T G A C C T A G A T C G C G A T A G T C T C G A A G T C A C G T C G A T A C T G A G T C
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

NR2F1/MA0017.2/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:ACAMAMGGTCACTTGC
--CAAAGGTCAAGGG-
 C G T A A T G C T G C A T G A C C T G A T G A C C T A G A T C G C G A T A G T C T C G A A G T C A C G T C G A T A C T G A G T C
A C G T A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G A C G T

Arntl/MA0603.1/Jaspar

Match Rank:8
Score:0.57
Offset:6
Orientation:forward strand
Alignment:ACAMAMGGTCACTTGC
------GGTCACGTGC
 C G T A A T G C T G C A T G A C C T G A T G A C C T A G A T C G C G A T A G T C T C G A A G T C A C G T C G A T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C

USF2/MA0526.1/Jaspar

Match Rank:9
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:ACAMAMGGTCACTTGC-
------GGTCACATGAC
 C G T A A T G C T G C A T G A C C T G A T G A C C T A G A T C G C G A T A G T C T C G A A G T C A C G T C G A T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C

Esrrg/MA0643.1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ACAMAMGGTCACTTGC
--TCAAGGTCAT----
 C G T A A T G C T G C A T G A C C T G A T G A C C T A G A T C G C G A T A G T C T C G A A G T C A C G T C G A T A C T G A G T C
A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T