Information for 16-CCCTTTACAC (Motif 28)

A G T C A G T C A G T C A C G T A C G T A C G T C G T A A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C G T C G T A C G T A C G T A A C T G A C T G A C T G
p-value:1e-6
log p-value:-1.508e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets67.2 +/- 20.5bp
Average Position of motif in Background29.4 +/- 10.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX20/MA0689.1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CCCTTTACAC---
--CTTCACACCTA
 A G T C A G T C A G T C A C G T A C G T A C G T C G T A A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

PH0158.1_Rhox11_2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCCTTTACAC------
TCNCTTTACAGCGNNNT
 A C G T A G T C A G T C A G T C A C G T A C G T A C G T C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

TBX2/MA0688.1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CCCTTTACAC---
--TTTCACACCTN
 A G T C A G T C A G T C A C G T A C G T A C G T C G T A A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCCTTTACAC--
--ATTAACACCT
 A G T C A G T C A G T C A C G T A C G T A C G T C G T A A G T C C G T A A G T C A C G T A C G T
A C G T A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCCTTTACAC--
--KTTCACACCT
 A G T C A G T C A G T C A C G T A C G T A C G T C G T A A G T C C G T A A G T C A C G T A C G T
A C G T A C G T C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CCCTTTACAC---
---TTMACACCTT
 A G T C A G T C A G T C A C G T A C G T A C G T C G T A A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

TATA-Box(TBP)/Promoter/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCCTTTACAC--
CCTTTTATAGNC
 A G T C A G T C A G T C A C G T A C G T A C G T C G T A A G T C C G T A A G T C A C G T A C G T
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

INSM1/MA0155.1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCCTTTACAC
CGCCCCCTGACA-
 A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T C G T A A G T C C G T A A G T C
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T

TBR1/MA0802.1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CCCTTTACAC--
--TTTCACACCT
 A G T C A G T C A G T C A C G T A C G T A C G T C G T A A G T C C G T A A G T C A C G T A C G T
A C G T A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T

Rhox11/MA0629.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCCTTTACAC------
TCNNTTTACAGCGNNNT
 A C G T A G T C A G T C A G T C A C G T A C G T A C G T C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T