Information for 11-GCGTATGGAG (Motif 20)

A C T G A G T C C T A G A C G T T C G A C G A T A C T G A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A G T C C G T A A G C T G T C A A G T C C T A G A G T C
p-value:1e-9
log p-value:-2.171e+01
Information Content per bp:1.877
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif15.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets43.2 +/- 20.0bp
Average Position of motif in Background44.3 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GCGTATGGAG
----GTGGAT
 A C T G A G T C C T A G A C G T T C G A C G A T A C T G A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCGTATGGAG
ACATATGG--
 A C T G A G T C C T A G A C G T T C G A C G A T A C T G A C T G C G T A A C T G
T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T

Neurog1/MA0623.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCGTATGGAG
ACCATATGGT-
 A C G T A C T G A G T C C T A G A C G T T C G A C G A T A C T G A C T G C G T A A C T G
T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A T C G G A C T A C G T

NEUROD2/MA0668.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCGTATGGAG
ACCATATGGC-
 A C G T A C T G A G T C C T A G A C G T T C G A C G A T A C T G A C T G C G T A A C T G
C T G A T G A C G T A C C T G A A C G T C T G A G A C T A T C G A C T G A G T C A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCGTATGGAG
VBSYGTCTGG--
 A C G T A C G T A C T G A G T C C T A G A C G T T C G A C G A T A C T G A C T G C G T A A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCGTATGGAG--
GRTGMTRGAGCC
 A C T G A G T C C T A G A C G T T C G A C G A T A C T G A C T G C G T A A C T G A C G T A C G T
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

BHLHE22/MA0818.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCGTATGGAG
ANCATATGGT-
 A C G T A C T G A G T C C T A G A C G T T C G A C G A T A C T G A C T G C G T A A C T G
C T G A T C G A T G A C C T G A A C G T C T G A G A C T A C T G A C T G A G C T A C G T

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GCGTATGGAG-
-----CGGAGC
 A C T G A G T C C T A G A C G T T C G A C G A T A C T G A C T G C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GCGTATGGAG---
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C T G A G T C C T A G A C G T T C G A C G A T A C T G A C T G C G T A A C T G A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

OLIG3/MA0827.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCGTATGGAG
ANCATATGGT-
 A C G T A C T G A G T C C T A G A C G T T C G A C G A T A C T G A C T G C G T A A C T G
C T G A T G C A G T A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T A C G T