Information for 10-GAAACCTGCC (Motif 19)

A C T G G T C A G T C A C G T A T G A C A G T C A G C T A C T G A T G C A G T C
Reverse Opposite:
C T A G A T C G G T A C C T G A C T A G A C T G C G A T A C G T A C G T G T A C
p-value:1e-9
log p-value:-2.191e+01
Information Content per bp:1.839
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.22%
Number of Background Sequences with motif150.1
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets51.1 +/- 25.8bp
Average Position of motif in Background52.4 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SNAI2/MA0745.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GAAACCTGCC
-NCACCTGTN
 A C T G G T C A G T C A C G T A T G A C A G T C A G C T A C T G A T G C A G T C
A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GAAACCTGCC
ACTGAAACCA---
 A C G T A C G T A C G T A C T G G T C A G T C A C G T A T G A C A G T C A G C T A C T G A T G C A G T C
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GAAACCTGCC--
-NNACTTGCCTT
 A C T G G T C A G T C A C G T A T G A C A G T C A G C T A C T G A T G C A G T C A C G T A C G T
A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GAAACCTGCC-
SNGCACCTGCHS
 A C G T A C T G G T C A G T C A C G T A T G A C A G T C A G C T A C T G A T G C A G T C A C G T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

ID4/MA0824.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GAAACCTGCC
TACACCTGTC
 A C T G G T C A G T C A C G T A T G A C A G T C A G C T A C T G A T G C A G T C
C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C

PKNOX2/MA0783.1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GAAACCTGCC-
TGACACCTGTCA
 A C G T A C T G G T C A G T C A C G T A T G A C A G T C A G C T A C T G A T G C A G T C A C G T
G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A

HES5/MA0821.1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GAAACCTGCC-
CGGCACGTGCCA
 A C G T A C T G G T C A G T C A C G T A T G A C A G T C A G C T A C T G A T G C A G T C A C G T
G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GAAACCTGCC
NNCACCTGNN
 A C T G G T C A G T C A C G T A T G A C A G T C A G C T A C T G A T G C A G T C
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

Hes2/MA0616.1/Jaspar

Match Rank:9
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GAAACCTGCC
TAACGACACGTGC-
 A C G T A C G T A C G T A C G T A C T G G T C A G T C A C G T A T G A C A G T C A G C T A C T G A T G C A G T C
A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GAAACCTGCC
RYHYACCTGB-
 A C G T A C T G G T C A G T C A C G T A T G A C A G T C A G C T A C T G A T G C A G T C
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T