Information for 6-GATTGGCCGC (Motif 13)

A C T G T C G A A G C T C G A T A T C G T A C G A G T C A T G C A T C G A T G C
Reverse Opposite:
A T C G A T G C T A C G C T A G A T G C A T G C C G T A C T G A A G C T G T A C
p-value:1e-10
log p-value:-2.479e+01
Information Content per bp:1.747
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.69%
Number of Background Sequences with motif384.0
Percentage of Background Sequences with motif0.81%
Average Position of motif in Targets55.7 +/- 24.2bp
Average Position of motif in Background47.9 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GATTGGCCGC
CCGATTGGCT--
 A C G T A C G T A C T G T C G A A G C T C G A T A T C G T A C G A G T C A T G C A T C G A T G C
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GATTGGCCGC---
CTGATTGGTCNATTT
 A C G T A C G T A C T G T C G A A G C T C G A T A T C G T A C G A G T C A T G C A T C G A T G C A C G T A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GATTGGCCGC-
TGATTGGCTANN
 A C G T A C T G T C G A A G C T C G A T A T C G T A C G A G T C A T G C A T C G A T G C A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

Dux/MA0611.1/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GATTGGCCGC
TTGATTGN----
 A C G T A C G T A C T G T C G A A G C T C G A T A T C G T A C G A G T C A T G C A T C G A T G C
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:5
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GATTGGCCGC
BTGABTGACAGS
 A C G T A C G T A C T G T C G A A G C T C G A T A T C G T A C G A G T C A T G C A T C G A T G C
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GATTGGCCGC
NTGATTGACAGN
 A C G T A C G T A C T G T C G A A G C T C G A T A T C G T A C G A G T C A T G C A T C G A T G C
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

NFYA/MA0060.2/Jaspar

Match Rank:7
Score:0.67
Offset:-8
Orientation:forward strand
Alignment:--------GATTGGCCGC
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G T C G A A G C T C G A T A T C G T A C G A G T C A T G C A T C G A T G C
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

Gfi1/MA0038.1/Jaspar

Match Rank:8
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GATTGGCCGC
CNGTGATTTN----
 A C G T A C G T A C G T A C G T A C T G T C G A A G C T C G A T A T C G T A C G A G T C A T G C A T C G A T G C
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GATTGGCCGC-
TGAGTGACAGSC
 A C G T A C T G T C G A A G C T C G A T A T C G T A C G A G T C A T G C A T C G A T G C A C G T
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GATTGGCCGC
--TTGGCA--
 A C T G T C G A A G C T C G A T A T C G T A C G A G T C A T G C A T C G A T G C
A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T