Information for 6-CTTGCACTTTGCATGT (Motif 11)

A G T C A G C T A C G T A C T G A G T C G T C A A G T C A C G T A C G T C G A T A C T G G T A C C G T A A C G T A T C G C A G T
Reverse Opposite:
G C T A A T G C G T C A A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C G T A C T G A G T C C G T A C T G A A C T G
p-value:1e-10
log p-value:-2.513e+01
Information Content per bp:1.910
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets24.8 +/- 10.9bp
Average Position of motif in Background41.9 +/- 11.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTTGCACTTTGCATGT--
--TGGACTTTGNNCTNTG
 A G T C A G C T A C G T A C T G A G T C G T C A A G T C A C G T A C G T C G A T A C T G G T A C C G T A A C G T A T C G C A G T A C G T A C G T
A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTTGCACTTTGCATGT-
--TGGACTTTGNNCTCN
 A G T C A G C T A C G T A C T G A G T C G T C A A G T C A C G T A C G T C G A T A C T G G T A C C G T A A C G T A T C G C A G T A C G T
A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

PB0146.1_Mafk_2/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTTGCACTTTGCATGT
CCTTGCAATTTTTNN--
 A C G T A G T C A G C T A C G T A C T G A G T C G T C A A G T C A C G T A C G T C G A T A C T G G T A C C G T A A C G T A T C G C A G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CTTGCACTTTGCATGT
------ATTTGCATAT
 A G T C A G C T A C G T A C T G A G T C G T C A A G T C A C G T A C G T C G A T A C T G G T A C C G T A A C G T A T C G C A G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

PRDM1/MA0508.1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTTGCACTTTGCATGT
TCACTTTCACTTTCN----
 A C G T A C G T A C G T A G T C A G C T A C G T A C T G A G T C G T C A A G T C A C G T A C G T C G A T A C T G G T A C C G T A A C G T A T C G C A G T
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T A C G T A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTTGCACTTTGCATGT
ACTTTCACTTTC-----
 A C G T A G T C A G C T A C G T A C T G A G T C G T C A A G T C A C G T A C G T C G A T A C T G G T A C C G T A A C G T A T C G C A G T
T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C A C G T A C G T A C G T A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CTTGCACTTTGCATGT
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T A C G T A C T G A G T C G T C A A G T C A C G T A C G T C G A T A C T G G T A C C G T A A C G T A T C G C A G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTTGCACTTTGCATGT
NNATTGGACTTTNGNN--
 A C G T A C G T A G T C A G C T A C G T A C T G A G T C G T C A A G T C A C G T A C G T C G A T A C T G G T A C C G T A A C G T A T C G C A G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.58
Offset:6
Orientation:forward strand
Alignment:CTTGCACTTTGCATGT
------ATTTGCATAA
 A G T C A G C T A C G T A C T G A G T C G T C A A G T C A C G T A C G T C G A T A C T G G T A C C G T A A C G T A T C G C A G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTTGCACTTTGCATGT
-CTGACCTTTG-----
 A G T C A G C T A C G T A C T G A G T C G T C A A G T C A C G T A C G T C G A T A C T G G T A C C G T A A C G T A T C G C A G T
A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T A C G T