Information for 9-CAGAGATGAACAT (Motif 22)

A G T C C G T A A C T G C G T A A T C G C T G A A C G T C T A G G T C A C G T A T A G C C T G A A C G T
Reverse Opposite:
G T C A G A C T A C T G A C G T A C G T A G T C C G T A A G C T A T G C A C G T T A G C A C G T A C T G
p-value:1e-10
log p-value:-2.517e+01
Information Content per bp:1.804
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif19.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets44.4 +/- 25.8bp
Average Position of motif in Background62.0 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CAGAGATGAACAT
-AGAAACGAAAGT
 A G T C C G T A A C T G C G T A A T C G C T G A A C G T C T A G G T C A C G T A T A G C C T G A A C G T
A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

Gata1/MA0035.3/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CAGAGATGAACAT
-ANAGATAAGAA-
 A G T C C G T A A C T G C G T A A T C G C T G A A C G T C T A G G T C A C G T A T A G C C T G A A C G T
A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T

GATA2/MA0036.2/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CAGAGATGAACAT--
-NCAGATAAGAANNN
 A G T C C G T A A C T G C G T A A T C G C T G A A C G T C T A G G T C A C G T A T A G C C T G A A C G T A C G T A C G T
A C G T C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T

GATA3/MA0037.2/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CAGAGATGAACAT
---AGATAAGA--
 A G T C C G T A A C T G C G T A A T C G C T G A A C G T C T A G G T C A C G T A T A G C C T G A A C G T
A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CAGAGATGAACAT
-AAAGATCAAAGG
 A G T C C G T A A C T G C G T A A T C G C T G A A C G T C T A G G T C A C G T A T A G C C T G A A C G T
A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------CAGAGATGAACAT
CAAATCCAGACATCACA--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A T C G C T G A A C G T C T A G G T C A C G T A T A G C C T G A A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CAGAGATGAACAT---
-AAAGATCAAAGGGTT
 A G T C C G T A A C T G C G T A A T C G C T G A A C G T C T A G G T C A C G T A T A G C C T G A A C G T A C G T A C G T A C G T
A C G T T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

POU2F2/MA0507.1/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CAGAGATGAACAT---
---ATATGCAAATNNN
 A G T C C G T A A C T G C G T A A T C G C T G A A C G T C T A G G T C A C G T A T A G C C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CAGAGATGAACAT
---ATATGCAAAT
 A G T C C G T A A C T G C G T A A T C G C T G A A C G T C T A G G T C A C G T A T A G C C T G A A C G T
A C G T A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

MF0005.1_Forkhead_class/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CAGAGATGAACAT
---AAATAAACA-
 A G T C C G T A A C T G C G T A A T C G C T G A A C G T C T A G G T C A C G T A T A G C C T G A A C G T
A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T