Information for 20-TGCTWDAATTAAG (Motif 31)

A C G T C T A G A T G C G C A T C G A T C A G T C T G A T C G A A G C T C G A T T C G A C G T A T C A G
Reverse Opposite:
A G T C A C G T A G C T C G T A T C G A A G C T A G C T G C T A G C T A C G T A T A C G A G T C C G T A
p-value:1e-8
log p-value:-1.944e+01
Information Content per bp:1.628
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif3.59%
Number of Background Sequences with motif400.0
Percentage of Background Sequences with motif0.82%
Average Position of motif in Targets42.9 +/- 25.2bp
Average Position of motif in Background52.9 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0090.1_Lbx2/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGCTWDAATTAAG----
TGCATTAATTAATGCGA
 A C G T C T A G A T G C G C A T C G A T C A G T C T G A T C G A A G C T C G A T T C G A C G T A T C A G A C G T A C G T A C G T A C G T
C G A T T A C G G T A C G T C A G A C T G A C T C G T A T C G A A G C T C G A T C T G A C T G A A G C T A C T G T A G C C T A G T C G A

PH0011.1_Alx1_2/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGCTWDAATTAAG----
CGCATTAATTAATTGGC
 A C G T C T A G A T G C G C A T C G A T C A G T C T G A T C G A A G C T C G A T T C G A C G T A T C A G A C G T A C G T A C G T A C G T
A G T C T C A G G T A C C T G A G A C T G A C T C T G A C G T A G A C T A G C T C T G A C T G A A G C T A G C T C T A G C T A G T G A C

PH0159.1_Rhox6/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGCTWDAATTAAG----
TGCCTTAATTAATGCTC
 A C G T C T A G A T G C G C A T C G A T C A G T C T G A T C G A A G C T C G A T T C G A C G T A T C A G A C G T A C G T A C G T A C G T
C G A T T C A G G T A C T G A C G A C T G A C T G C T A T C G A A C G T C G A T C G T A C T G A A G C T A C T G A T G C C G A T G A T C

Arx/MA0874.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGCTWDAATTAAG----
TNCATTAATTAATGNAC
 A C G T C T A G A T G C G C A T C G A T C A G T C T G A T C G A A G C T C G A T T C G A C G T A T C A G A C G T A C G T A C G T A C G T
C G A T T A G C G T A C C G T A A G C T G A C T C G T A C G T A G A C T C G A T C T G A C T G A G A C T A C T G T A C G T G C A A G T C

PH0003.1_Arx/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGCTWDAATTAAG----
TNCATTAATTAATGNAC
 A C G T C T A G A T G C G C A T C G A T C A G T C T G A T C G A A G C T C G A T T C G A C G T A T C A G A C G T A C G T A C G T A C G T
C G A T T A G C G T A C C G T A A G C T G A C T C G T A C G T A G A C T C G A T C T G A C T G A G A C T A C T G T A C G T G C A A G T C

PB0001.1_Arid3a_1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGCTWDAATTAAG---
NNNTTTTAATTAANNNN
 A C G T A C G T C T A G A T G C G C A T C G A T C A G T C T G A T C G A A G C T C G A T T C G A C G T A T C A G A C G T A C G T A C G T
C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C

LMX1B/MA0703.1/Jaspar

Match Rank:7
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TGCTWDAATTAAG
----TTAATTAA-
 A C G T C T A G A T G C G C A T C G A T C A G T C T G A T C G A A G C T C G A T T C G A C G T A T C A G
A C G T A C G T A C G T A C G T A C G T G A C T C G T A G C T A C G A T C G A T G C T A T C G A A C G T

PH0096.1_Lhx6_1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGCTWDAATTAAG----
TACATTAATTAACGNTN
 A C G T C T A G A T G C G C A T C G A T C A G T C T G A T C G A A G C T C G A T T C G A C G T A T C A G A C G T A C G T A C G T A C G T
C G A T T C G A G T A C T G C A G A C T G A C T T C G A C T G A A G C T A G C T C T G A C T G A A G T C C A T G A G T C G C A T A T G C

PH0143.1_Pou2f1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGCTWDAATTAAG--
ATATATTAATTAAGTA
 A C G T A C G T C T A G A T G C G C A T C G A T C A G T C T G A T C G A A G C T C G A T T C G A C G T A T C A G A C G T A C G T
C T G A G A C T C T A G G C A T C T G A G C A T G C A T G T C A C G T A C G A T A C G T G C T A C T G A A C T G G C A T C G T A

Arid3b/MA0601.1/Jaspar

Match Rank:10
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TGCTWDAATTAAG--
----NTAATTAATAT
 A C G T C T A G A T G C G C A T C G A T C A G T C T G A T C G A A G C T C G A T T C G A C G T A T C A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T