Information for 19-CCTCTGCCCCGGT (Motif 27)

A G T C A G T C A C G T A G T C G A C T A C T G A G T C A G T C A G T C A G T C A C T G A C T G A C G T
Reverse Opposite:
C G T A G T A C A G T C A C T G A C T G A C T G A C T G A G T C C T G A A C T G C G T A A C T G C T A G
p-value:1e-8
log p-value:-2.035e+01
Information Content per bp:1.939
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.5 +/- 24.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CCTCTGCCCCGGT
TGACCTTTGCCCTAN-
 A C G T A C G T A C G T A G T C A G T C A C G T A G T C G A C T A C T G A G T C A G T C A G T C A G T C A C T G A C T G A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CCTCTGCCCCGGT
TGACCTTTGCCCTA--
 A C G T A C G T A C G T A G T C A G T C A C G T A G T C G A C T A C T G A G T C A G T C A G T C A G T C A C T G A C T G A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CCTCTGCCCCGGT
TGACCTTTGCCCCA--
 A C G T A C G T A C G T A G T C A G T C A C G T A G T C G A C T A C T G A G T C A G T C A G T C A G T C A C T G A C T G A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CCTCTGCCCCGGT
TGACCTCTGACCCCN-
 A C G T A C G T A C G T A G T C A G T C A C G T A G T C G A C T A C T G A G T C A G T C A G T C A G T C A C T G A C T G A C G T
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCTCTGCCCCGGT--
TCACCCCGCCCCAAATT
 A C G T A C G T A G T C A G T C A C G T A G T C G A C T A C T G A G T C A G T C A G T C A G T C A C T G A C T G A C G T A C G T A C G T
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CCTCTGCCCCGGT-
----TGCCCAGNHW
 A G T C A G T C A C G T A G T C G A C T A C T G A G T C A G T C A G T C A G T C A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

PB0110.1_Bcl6b_2/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCTCTGCCCCGGT--
ATCCCCGCCCCTAAAA
 A C G T A G T C A G T C A C G T A G T C G A C T A C T G A G T C A G T C A G T C A G T C A C T G A C T G A C G T A C G T A C G T
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCTCTGCCCCGGT
NAGCCCCGCCCCCN-
 A C G T A C G T A G T C A G T C A C G T A G T C G A C T A C T G A G T C A G T C A G T C A G T C A C T G A C T G A C G T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCTCTGCCCCGGT
GCTCCGCCCMCY-
 A G T C A G T C A C G T A G T C G A C T A C T G A G T C A G T C A G T C A G T C A C T G A C T G A C G T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCTCTGCCCCGGT
GGCCCCGCCCCC--
 A C G T A G T C A G T C A C G T A G T C G A C T A C T G A G T C A G T C A G T C A G T C A C T G A C T G A C G T
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T