Information for 15-YTGTAGKGACCTC (Motif 23)

G A C T A C G T A T C G A G C T G T C A C A T G C A T G A T C G G T C A A G T C G T A C A C G T A T G C
Reverse Opposite:
T A C G C G T A A C T G C T A G A C G T A T G C G T A C G A T C C A G T C T G A A T G C G T C A C T G A
p-value:1e-9
log p-value:-2.081e+01
Information Content per bp:1.713
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.09%
Number of Background Sequences with motif112.0
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets53.6 +/- 25.6bp
Average Position of motif in Background48.6 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:YTGTAGKGACCTC
-----GTGACCTT
 G A C T A C G T A T C G A G C T G T C A C A T G C A T G A T C G G T C A A G T C G T A C A C G T A T G C
A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:YTGTAGKGACCTC
GGTTAGAGACCT-
 G A C T A C G T A T C G A G C T G T C A C A T G C A T G A T C G G T C A A G T C G T A C A C G T A T G C
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:YTGTAGKGACCTC-
------TGACCTYA
 G A C T A C G T A T C G A G C T G T C A C A T G C A T G A T C G G T C A A G T C G T A C A C G T A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:YTGTAGKGACCTC-
------TGACCYCT
 G A C T A C G T A T C G A G C T G T C A C A T G C A T G A T C G G T C A A G T C G T A C A C G T A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.58
Offset:5
Orientation:forward strand
Alignment:YTGTAGKGACCTC--
-----NTGACCTTGA
 G A C T A C G T A T C G A G C T G T C A C A T G C A T G A T C G G T C A A G T C G T A C A C G T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:YTGTAGKGACCTC
------TGACCT-
 G A C T A C G T A T C G A G C T G T C A C A T G C A T G A T C G G T C A A G T C G T A C A C G T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---YTGTAGKGACCTC
GTNTTGTTGTGANNT-
 A C G T A C G T A C G T G A C T A C G T A T C G A G C T G T C A C A T G C A T G A T C G G T C A A G T C G T A C A C G T A T G C
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T A C G T

ZBED1/MA0749.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:YTGTAGKGACCTC
CTATCGCGACATA
 G A C T A C G T A T C G A G C T G T C A C A T G C A T G A T C G G T C A A G T C G T A C A C G T A T G C
G T A C C G A T T C G A G A C T A G T C T C A G G A T C T A C G T C G A G A T C G C T A A C G T C T G A

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:YTGTAGKGACCTC---
------TGACCTTGAT
 G A C T A C G T A T C G A G C T G T C A C A T G C A T G A T C G G T C A A G T C G T A C A C G T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----YTGTAGKGACCTC
TGACCTNTAGTAACCC-
 A C G T A C G T A C G T A C G T G A C T A C G T A T C G A G C T G T C A C A T G C A T G A T C G G T C A A G T C G T A C A C G T A T G C
G A C T C T A G T G C A G T A C G A T C A G C T T A C G C A G T C T G A C T A G G C A T C T G A C T G A G T A C G T A C G A T C A C G T