Information for 12-KCTCTKGGWAACT (Motif 19)

C A T G A G T C A C G T A T G C A C G T A C T G A C T G A C T G G C A T C G T A C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G C G A T A C G T C G A T A G T C A G T C G T A C C G T A A T C G C G T A A C T G G T A C
p-value:1e-9
log p-value:-2.273e+01
Information Content per bp:1.888
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.5 +/- 30.4bp
Average Position of motif in Background49.1 +/- 21.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:KCTCTKGGWAACT
-TTCTTGGAAAN-
 C A T G A G T C A C G T A T G C A C G T A C T G A C T G A C T G G C A T C G T A C G T A A G T C A C G T
A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:KCTCTKGGWAACT
CTTCTGGGAAA--
 C A T G A G T C A C G T A T G C A C G T A C T G A C T G A C T G G C A T C G T A C G T A A G T C A C G T
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T A C G T

STAT1/MA0137.3/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:KCTCTKGGWAACT
TTTCCAGGAAA--
 C A T G A G T C A C G T A T G C A C G T A C T G A C T G A C T G G C A T C G T A C G T A A G T C A C G T
A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:KCTCTKGGWAACT
WDNCTGGGCA---
 C A T G A G T C A C G T A T G C A C G T A C T G A C T G A C T G G C A T C G T A C G T A A G T C A C G T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----KCTCTKGGWAACT
NNNCTTTCCAGGAAA--
 A C G T A C G T A C G T A C G T C A T G A G T C A C G T A T G C A C G T A C T G A C T G A C T G G C A T C G T A C G T A A G T C A C G T
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:KCTCTKGGWAACT-
--SCCTAGCAACAG
 C A T G A G T C A C G T A T G C A C G T A C T G A C T G A C T G G C A T C G T A C G T A A G T C A C G T A C G T
A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:KCTCTKGGWAACT
--CSTGGGAAAD-
 C A T G A G T C A C G T A T G C A C G T A C T G A C T G A C T G G C A T C G T A C G T A A G T C A C G T
A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:KCTCTKGGWAACT
TTTCTNAGAAAN-
 C A T G A G T C A C G T A T G C A C G T A C T G A C T G A C T G G C A T C G T A C G T A A G T C A C G T
A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T A C G T

PB0158.1_Rfx3_2/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----KCTCTKGGWAACT------
ACTGACCCTTGGTTACCACAAAG
 A C G T A C G T A C G T A C G T C A T G A G T C A C G T A T G C A C G T A C T G A C T G A C T G G C A T C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G

Rfx1/MA0509.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--KCTCTKGGWAACT
GTTGCCATGGCAAC-
 A C G T A C G T C A T G A G T C A C G T A T G C A C G T A C T G A C T G A C T G G C A T C G T A C G T A A G T C A C G T
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T