Information for 11-GKGMCSAAYACCA (Motif 18)

A C T G A C T G A C T G G T A C T A G C A T C G C G T A C G T A A G C T C G T A A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A C G T C T G A A C G T A C G T A T G C A C T G A C T G A G T C G T A C A G T C
p-value:1e-9
log p-value:-2.280e+01
Information Content per bp:1.869
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.8 +/- 20.5bp
Average Position of motif in Background43.0 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0106.1_Arid5a_2/Jaspar

Match Rank:1
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GKGMCSAAYACCA-----
-CATACAATACGAAATAA
 A C T G A C T G A C T G G T A C T A G C A T C G C G T A C G T A A G C T C G T A A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GKGMCSAAYACCA---
-GGGCGATGACCAYTC
 A C T G A C T G A C T G G T A C T A G C A T C G C G T A C G T A A G C T C G T A A G T C A G T C C G T A A C G T A C G T A C G T
A C G T C T A G T A C G T C A G A G T C A C T G T G C A A G C T A C T G G T C A G T A C G A T C C T G A A G T C A C G T A T G C

Hnf4a/MA0114.3/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GKGMCSAAYACCA--
GGGGTCAAAGTCCAAT
 A C G T A C T G A C T G A C T G G T A C T A G C A T C G C G T A C G T A A G C T C G T A A G T C A G T C C G T A A C G T A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GKGMCSAAYACCA---
-TGACANARRCCAGRC
 A C T G A C T G A C T G G T A C T A G C A T C G C G T A C G T A A G C T C G T A A G T C A G T C C G T A A C G T A C G T A C G T
A C G T C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----GKGMCSAAYACCA
GGGTGTGCCCAAAAGG-
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G G T A C T A G C A T C G C G T A C G T A A G C T C G T A A G T C A G T C C G T A
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G A C G T

ZBTB7A/MA0750.1/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GKGMCSAAYACCA-
--GGCGACCACCGA
 A C T G A C T G A C T G G T A C T A G C A T C G C G T A C G T A A G C T C G T A A G T C A G T C C G T A A C G T
A C G T A C G T A C T G T C A G A T G C C T A G G T C A A G T C A T G C G T C A A G T C G T A C C A T G T G C A

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GKGMCSAAYACCA----
CATAAGACCACCATTAC
 A C T G A C T G A C T G G T A C T A G C A T C G C G T A C G T A A G C T C G T A A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

PB0108.1_Atf1_2/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GKGMCSAAYACCA
GAATGACGAATAAC-
 A C G T A C G T A C T G A C T G A C T G G T A C T A G C A T C G C G T A C G T A A G C T C G T A A G T C A G T C C G T A
T A C G C T G A T C G A A C G T C T A G C G T A A G T C C T A G G T C A C T G A A G C T C G T A C G T A G T A C A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.50
Offset:6
Orientation:forward strand
Alignment:GKGMCSAAYACCA-----
------NWAACCACADNN
 A C T G A C T G A C T G G T A C T A G C A T C G C G T A C G T A A G C T C G T A A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

ZBTB7C/MA0695.1/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GKGMCSAAYACCA--
---GCGACCACCGAA
 A C T G A C T G A C T G G T A C T A G C A T C G C G T A C G T A A G C T C G T A A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A