Information for 11-TACCATGCTCTGVAGG (Motif 15)

A C G T C G T A A G T C G T A C C G T A A G C T A T C G A G T C C G A T A T G C G A C T A C T G T A G C C G T A C T A G A C T G
Reverse Opposite:
G T A C A G T C A C G T A C T G A G T C C T G A A T C G C G T A C T A G A T G C C T G A A C G T A C T G A C T G C G A T G T C A
p-value:1e-11
log p-value:-2.577e+01
Information Content per bp:1.755
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.0 +/- 23.6bp
Average Position of motif in Background56.3 +/- 17.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TACCATGCTCTGVAGG
NNTCCTGCTGTGNNN-
 A C G T C G T A A G T C G T A C C G T A A G C T A T C G A G T C C G A T A T G C G A C T A C T G T A G C C G T A C T A G A C T G
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TACCATGCTCTGVAGG
TCNCCTGCTGNGNNN-
 A C G T C G T A A G T C G T A C C G T A A G C T A T C G A G T C C G A T A T G C G A C T A C T G T A G C C G T A C T A G A C T G
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TACCATGCTCTGVAGG
TNTCCTGCTGTGNNG-
 A C G T C G T A A G T C G T A C C G T A A G C T A T C G A G T C C G A T A T G C G A C T A C T G T A G C C G T A C T A G A C T G
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----TACCATGCTCTGVAGG
NTNATGCAAYMNNHTGMAAY
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C G T A C C G T A A G C T A T C G A G T C C G A T A T G C G A C T A C T G T A G C C G T A C T A G A C T G
T G C A G C A T C G A T C G T A C A G T A C T G G T A C C G T A C T G A A G C T G T C A A C T G C T A G G T C A C G A T A C T G G T A C T G C A C G T A A G C T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.48
Offset:3
Orientation:forward strand
Alignment:TACCATGCTCTGVAGG
---CCTGCTGAGH---
 A C G T C G T A A G T C G T A C C G T A A G C T A T C G A G T C C G A T A T G C G A C T A C T G T A G C C G T A C T A G A C T G
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:6
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--TACCATGCTCTGVAGG
GCNGCCATCTTG------
 A C G T A C G T A C G T C G T A A G T C G T A C C G T A A G C T A T C G A G T C C G A T A T G C G A C T A C T G T A G C C G T A C T A G A C T G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:7
Score:0.47
Offset:-2
Orientation:forward strand
Alignment:--TACCATGCTCTGVAGG
GCGACCACACTG------
 A C G T A C G T A C G T C G T A A G T C G T A C C G T A A G C T A T C G A G T C C G A T A T G C G A C T A C T G T A G C C G T A C T A G A C T G
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:TACCATGCTCTGVAGG
CCCCCTGCTGTG----
 A C G T C G T A A G T C G T A C C G T A A G C T A T C G A G T C C G A T A T G C G A C T A C T G T A G C C G T A C T A G A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:9
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:TACCATGCTCTGVAGG
TAGAANVTTCTAGAA-
 A C G T C G T A A G T C G T A C C G T A A G C T A T C G A G T C C G A T A T G C G A C T A C T G T A G C C G T A C T A G A C T G
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A A C G T

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.46
Offset:6
Orientation:forward strand
Alignment:TACCATGCTCTGVAGG
------GCTCCG----
 A C G T C G T A A G T C G T A C C G T A A G C T A T C G A G T C C G A T A T G C G A C T A C T G T A G C C G T A C T A G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T