p-value: | 1e-11 |
log p-value: | -2.625e+01 |
Information Content per bp: | 1.722 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.75% |
Number of Background Sequences with motif | 1.7 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 54.4 +/- 22.1bp |
Average Position of motif in Background | 21.3 +/- 7.2bp |
Strand Bias (log2 ratio + to - strand density) | 2.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0172.1_Tlx2/Jaspar
Match Rank: | 1 |
Score: | 0.55 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TCATGAAGTYWTTTGG AANTTATTAATTAATTA-- |
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PH0112.1_Nkx2-3/Jaspar
Match Rank: | 2 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TCATGAAGTYWTTTGG- -CNTTAAGTACTTAANG |
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PH0088.1_Isl2/Jaspar
Match Rank: | 3 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TCATGAAGTYWTTTGG AAATTAATTGATTTNG |
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Hoxd8/MA0910.1/Jaspar
Match Rank: | 4 |
Score: | 0.54 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TCATGAAGTYWTTTGG NAGCCATTAATTANTTA-- |
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PH0080.1_Hoxd8/Jaspar
Match Rank: | 5 |
Score: | 0.54 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TCATGAAGTYWTTTGG NAGCCATTAATTANTTA-- |
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PH0073.1_Hoxc9/Jaspar
Match Rank: | 6 |
Score: | 0.54 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----TCATGAAGTYWTTTGG GGAGGTCATTAATTAT----- |
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PH0058.1_Hoxb3/Jaspar
Match Rank: | 7 |
Score: | 0.54 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------TCATGAAGTYWTTTGG TNNNACTAATTAGNTCA----- |
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PB0066.1_Sox17_1/Jaspar
Match Rank: | 8 |
Score: | 0.53 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TCATGAAGTYWTTTGG NNATNAATTGTTTNN- |
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PH0146.1_Pou3f1/Jaspar
Match Rank: | 9 |
Score: | 0.53 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TCATGAAGTYWTTTGG AATTAATTAATTAATTC-- |
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Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
Match Rank: | 10 |
Score: | 0.52 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TCATGAAGTYWTTTGG ---TTAAGTGCTT--- |
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