Information for 25-AGGGCCCATGGTTTCA (Motif 46)

C G T A A C T G A C T G A C T G G T A C A G T C A G T C G T C A A C G T A C T G A C T G A G C T A C G T G A C T A G T C C T G A
Reverse Opposite:
A G C T A C T G C T G A C G T A C T G A A G T C A G T C C G T A A C G T A C T G A C T G A C T G A G T C A G T C A G T C C G A T
p-value:1e-3
log p-value:-9.120e+00
Information Content per bp:1.922
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.28%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.8 +/- 18.3bp
Average Position of motif in Background35.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.63
Offset:8
Orientation:reverse strand
Alignment:AGGGCCCATGGTTTCA--
--------TGGTTTCAGT
 C G T A A C T G A C T G A C T G G T A C A G T C A G T C G T C A A C G T A C T G A C T G A G C T A C G T G A C T A G T C C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

RXRA::VDR/MA0074.1/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGGGCCCATGGTTTCA
-GGGTCAACGAGTTCA
 C G T A A C T G A C T G A C T G G T A C A G T C A G T C G T C A A C G T A C T G A C T G A G C T A C G T G A C T A G T C C T G A
A C G T C T A G A C T G A C T G A C G T A G T C C T G A G C A T A G T C C T A G C T A G A C T G A C G T C G A T A G T C T C G A

PB0159.1_Rfx4_2/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGGGCCCATGGTTTCA--
---TACCCTAGTTACCGA
 C G T A A C T G A C T G A C T G G T A C A G T C A G T C G T C A A C G T A C T G A C T G A G C T A C G T G A C T A G T C C T G A A C G T A C G T
A C G T A C G T A C G T G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.55
Offset:5
Orientation:forward strand
Alignment:AGGGCCCATGGTTTCA
-----CCATTGTTYB-
 C G T A A C T G A C T G A C T G G T A C A G T C A G T C G T C A A C G T A C T G A C T G A G C T A C G T G A C T A G T C C T G A
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T

SOX9/MA0077.1/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:forward strand
Alignment:AGGGCCCATGGTTTCA
-----CCATTGTTC--
 C G T A A C T G A C T G A C T G G T A C A G T C A G T C G T C A A C G T A C T G A C T G A G C T A C G T G A C T A G T C C T G A
A C G T A C G T A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGGGCCCATGGTTTCA
AGGVNCCTTTGT----
 C G T A A C T G A C T G A C T G G T A C A G T C A G T C G T C A A C G T A C T G A C T G A G C T A C G T G A C T A G T C C T G A
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AGGGCCCATGGTTTCA
----NCCATTGTTC--
 C G T A A C T G A C T G A C T G G T A C A G T C A G T C G T C A A C G T A C T G A C T G A G C T A C G T G A C T A G T C C T G A
A C G T A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:8
Score:0.53
Offset:5
Orientation:forward strand
Alignment:AGGGCCCATGGTTTCA
-----CCATTGTTTT-
 C G T A A C T G A C T G A C T G G T A C A G T C A G T C G T C A A C G T A C T G A C T G A G C T A C G T G A C T A G T C C T G A
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.52
Offset:5
Orientation:forward strand
Alignment:AGGGCCCATGGTTTCA
-----CCTTTGTT---
 C G T A A C T G A C T G A C T G G T A C A G T C A G T C G T C A A C G T A C T G A C T G A G C T A C G T G A C T A G T C C T G A
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:10
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:AGGGCCCATGGTTTCA
----NCCATTGTTY--
 C G T A A C T G A C T G A C T G G T A C A G T C A G T C G T C A A C G T A C T G A C T G A G C T A C G T G A C T A G T C C T G A
A C G T A C G T A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T