Information for 11-CTTAGYTTAAGCT (Motif 34)

A T G C A C G T C G A T C G T A C T A G A G C T A G C T G A C T G C T A C G T A T C A G A T G C A G C T
Reverse Opposite:
C T G A A T C G A G T C G C A T C A G T C G T A C T G A C T G A A G T C C G A T C G T A T C G A T A C G
p-value:1e-8
log p-value:-1.925e+01
Information Content per bp:1.691
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif15.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets37.7 +/- 25.7bp
Average Position of motif in Background60.8 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.57
Offset:7
Orientation:forward strand
Alignment:CTTAGYTTAAGCT-
-------CAAGCTT
 A T G C A C G T C G A T C G T A C T A G A G C T A G C T G A C T G C T A C G T A T C A G A T G C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:2
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CTTAGYTTAAGCT
NWTGATTRGRTTAWN--
 A C G T A C G T A C G T A C G T A T G C A C G T C G A T C G T A C T A G A G C T A G C T G A C T G C T A C G T A T C A G A T G C A G C T
C G T A G C A T C G A T C T A G C G T A A C G T A C G T C T G A T C A G C T A G A C G T A C G T G C T A C G T A G T A C A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:3
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CTTAGYTTAAGCT
NNNNTTTGTTTACNNT
 A C G T A C G T A C G T A T G C A C G T C G A T C G T A C T A G A G C T A G C T G A C T G C T A C G T A T C A G A T G C A G C T
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

DUX4/MA0468.1/Jaspar

Match Rank:4
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CTTAGYTTAAGCT
TGATTAAATTA----
 A C G T A C G T A T G C A C G T C G A T C G T A C T A G A G C T A G C T G A C T G C T A C G T A T C A G A T G C A G C T
C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A A C G T A C G T A C G T A C G T

DUXA/MA0884.1/Jaspar

Match Rank:5
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CTTAGYTTAAGCT
NTGATTAAATTAN---
 A C G T A C G T A C G T A T G C A C G T C G A T C G T A C T A G A G C T A G C T G A C T G C T A C G T A T C A G A T G C A G C T
G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G A C G T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CTTAGYTTAAGCT
GCTATTTTTAGC-
 A T G C A C G T C G A T C G T A C T A G A G C T A G C T G A C T G C T A C G T A T C A G A T G C A G C T
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C A C G T

PH0167.1_Tcf1/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CTTAGYTTAAGCT---
NTTTTAGTTAACNNAGN
 A C G T A T G C A C G T C G A T C G T A C T A G A G C T A G C T G A C T G C T A C G T A T C A G A T G C A G C T A C G T A C G T A C G T
T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

PHOX2A/MA0713.1/Jaspar

Match Rank:8
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CTTAGYTTAAGCT
TAATTAAATTA----
 A C G T A C G T A T G C A C G T C G A T C G T A C T A G A G C T A G C T G A C T G C T A C G T A T C A G A T G C A G C T
G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A A C G T A C G T A C G T A C G T

PB0019.1_Foxl1_1/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CTTAGYTTAAGCT--
NNNTTTGTTTACATTTN
 A C G T A C G T A T G C A C G T C G A T C G T A C T A G A G C T A G C T G A C T G C T A C G T A T C A G A T G C A G C T A C G T A C G T
T G C A A G T C A T G C G C A T C G A T C G A T C T A G A G C T C G A T A C G T C G T A G A T C C G T A G C A T C G A T G C A T G C T A

PB0161.1_Rxra_2/Jaspar

Match Rank:10
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---CTTAGYTTAAGCT
TCGCGAAGGTTGTACT
 A C G T A C G T A C G T A T G C A C G T C G A T C G T A C T A G A G C T A G C T G A C T G C T A C G T A T C A G A T G C A G C T
C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T