Information for 14-YHGCTGCTGKGTTBCB (Motif 28)

A G T C G A T C A C T G A G T C A C G T A C T G A G T C A G C T A T C G A C G T A T C G A G C T A C G T A G T C A G T C A G C T
Reverse Opposite:
T C G A C T A G T C A G C G T A C T G A A T G C G T C A A T G C C T G A T C A G A G T C C G T A C T A G G T A C C T A G C T A G
p-value:1e-8
log p-value:-2.043e+01
Information Content per bp:1.712
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif42.3
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets58.8 +/- 17.5bp
Average Position of motif in Background52.9 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:YHGCTGCTGKGTTBCB-
CAKCTGKYCYYTTYCCC
 A G T C G A T C A C T G A G T C A C G T A C T G A G T C A G C T A T C G A C G T A T C G A G C T A C G T A G T C A G T C A G C T A C G T
T G A C G C T A A C G T T G A C C G A T A C T G A C T G A G T C A G T C A G T C A G C T A G C T A G C T A G C T G A T C T G A C G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-YHGCTGCTGKGTTBCB
CCCCCTGCTGTG-----
 A C G T A G T C G A T C A C T G A G T C A C G T A C T G A G T C A G C T A T C G A C G T A T C G A G C T A C G T A G T C A G T C A G C T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-YHGCTGCTGKGTTBCB
NCAGCTGCTG-------
 A C G T A G T C G A T C A C T G A G T C A C G T A C T G A G T C A G C T A T C G A C G T A T C G A G C T A C G T A G T C A G T C A G C T
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-YHGCTGCTGKGTTBCB
TNTCCTGCTGTGNNG--
 A C G T A G T C G A T C A C T G A G T C A C G T A C T G A G T C A G C T A T C G A C G T A T C G A G C T A C G T A G T C A G T C A G C T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--YHGCTGCTGKGTTBCB
AGCAGCTGCTNN------
 A C G T A C G T A G T C G A T C A C T G A G T C A C G T A C T G A G T C A G C T A T C G A C G T A T C G A G C T A C G T A G T C A G T C A G C T
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--YHGCTGCTGKGTTBCB
AGCAGCTGCT--------
 A C G T A C G T A G T C G A T C A C T G A G T C A C G T A C T G A G T C A G C T A T C G A C G T A T C G A G C T A C G T A G T C A G T C A G C T
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:YHGCTGCTGKGTTBCB
CAGCTGNT--------
 A G T C G A T C A C T G A G T C A C G T A C T G A G T C A G C T A T C G A C G T A T C G A G C T A C G T A G T C A G T C A G C T
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-YHGCTGCTGKGTTBCB
TCNCCTGCTGNGNNN--
 A C G T A G T C G A T C A C T G A G T C A C G T A C T G A G T C A G C T A T C G A C G T A T C G A G C T A C G T A G T C A G T C A G C T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:YHGCTGCTGKGTTBCB
CAGCTGTT--------
 A G T C G A T C A C T G A G T C A C G T A C T G A G T C A G C T A T C G A C G T A T C G A G C T A C G T A G T C A G T C A G C T
A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---YHGCTGCTGKGTTBCB
GGCCYCCTGCTGDGH----
 A C G T A C G T A C G T A G T C G A T C A C T G A G T C A C G T A C T G A G T C A G C T A T C G A C G T A T C G A G C T A C G T A G T C A G T C A G C T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T