p-value: | 1e-9 |
log p-value: | -2.152e+01 |
Information Content per bp: | 1.828 |
Number of Target Sequences with motif | 16.0 |
Percentage of Target Sequences with motif | 2.20% |
Number of Background Sequences with motif | 135.9 |
Percentage of Background Sequences with motif | 0.28% |
Average Position of motif in Targets | 50.9 +/- 26.5bp |
Average Position of motif in Background | 53.2 +/- 30.7bp |
Strand Bias (log2 ratio + to - strand density) | 0.4 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
RELA/MA0107.1/Jaspar
Match Rank: | 1 |
Score: | 0.67 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CGGATTCTCC GGGAATTTCC |
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NFKB1/MA0105.4/Jaspar
Match Rank: | 2 |
Score: | 0.64 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CGGATTCTCC- AGGGGAATCCCCT |
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NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer
Match Rank: | 3 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CGGATTCTCC- GGGGATTCCCCC |
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REL/MA0101.1/Jaspar
Match Rank: | 4 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CGGATTCTCC GGGGATTTCC |
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PB0139.1_Irf5_2/Jaspar
Match Rank: | 5 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CGGATTCTCC----- NNAATTCTCGNTNAN |
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NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer
Match Rank: | 6 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CGGATTCTCC GGGAATTTCC |
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NFKB2/MA0778.1/Jaspar
Match Rank: | 7 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CGGATTCTCC- AGGGGATTCCCCT |
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NFATC2/MA0152.1/Jaspar
Match Rank: | 8 |
Score: | 0.62 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CGGATTCTCC- ----TTTTCCA |
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MF0003.1_REL_class/Jaspar
Match Rank: | 9 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CGGATTCTCC GGGGATTTCC |
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PH0015.1_Crx/Jaspar
Match Rank: | 10 |
Score: | 0.60 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----CGGATTCTCC- CGTTGGGGATTAGCCT |
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