Information for 1-CCGCCAGTGGGCA (Motif 5)

T A G C G T A C A C T G G T A C A G T C C G T A C T A G C A G T C A T G A C T G C T A G A T G C C T G A
Reverse Opposite:
A G C T A T C G A G T C A G T C G A T C G T C A A G T C A C G T A C T G A C T G G T A C C A T G A C T G
p-value:1e-11
log p-value:-2.589e+01
Information Content per bp:1.780
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.47%
Number of Background Sequences with motif32.8
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets49.5 +/- 21.5bp
Average Position of motif in Background44.7 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CCGCCAGTGGGCA------
GCCASCAGGGGGCGCYVNNG
 A C G T T A G C G T A C A C T G G T A C A G T C C G T A C T A G C A G T C A T G A C T G C T A G A T G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:forward strand
Alignment:CCGCCAGTGGGCA-
CCGCCCAAGGGCAG
 T A G C G T A C A C T G G T A C A G T C C G T A C T A G C A G T C A T G A C T G C T A G A T G C C T G A A C G T
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CCGCCAGTGGGCA---
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T T A G C G T A C A C T G G T A C A G T C C G T A C T A G C A G T C A T G A C T G C T A G A T G C C T G A A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CCGCCAGTGGGCA----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T T A G C G T A C A C T G G T A C A G T C C G T A C T A G C A G T C A T G A C T G C T A G A T G C C T G A A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:5
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CCGCCAGTGGGCA-
TCACCTCTGGGCAG
 T A G C G T A C A C T G G T A C A G T C C G T A C T A G C A G T C A T G A C T G C T A G A T G C C T G A A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CCGCCAGTGGGCA
-TGCCCNGGGGCA
 T A G C G T A C A C T G G T A C A G T C C G T A C T A G C A G T C A T G A C T G C T A G A T G C C T G A
A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:CCGCCAGTGGGCA-
-----NGTGGGCAT
 T A G C G T A C A C T G G T A C A G T C C G T A C T A G C A G T C A T G A C T G C T A G A T G C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

TFAP2C/MA0524.2/Jaspar

Match Rank:8
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CCGCCAGTGGGCA
-TGCCCCAGGGCA
 T A G C G T A C A C T G G T A C A G T C C G T A C T A G C A G T C A T G A C T G C T A G A T G C C T G A
A C G T G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A

TFAP2B/MA0811.1/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CCGCCAGTGGGCA
-TGCCCTNGGGCA
 T A G C G T A C A C T G G T A C A G T C C G T A C T A G C A G T C A T G A C T G C T A G A T G C C T G A
A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

INSM1/MA0155.1/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CCGCCAGTGGGCA
-TGTCAGGGGGCG
 T A G C G T A C A C T G G T A C A G T C C G T A C T A G C A G T C A T G A C T G C T A G A T G C C T G A
A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G