Information for 3-GACCGCCACCTCA (Motif 9)

A T C G C G T A A G T C A G T C A T C G A G T C A G T C C T G A A G T C A G T C A C G T G T A C T C G A
Reverse Opposite:
A G C T A C T G C G T A A C T G A C T G A G C T A C T G A C T G A T G C C T A G A C T G C G A T A T G C
p-value:1e-11
log p-value:-2.536e+01
Information Content per bp:1.841
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.6 +/- 28.6bp
Average Position of motif in Background80.3 +/- 4.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0010.1_Egr1_1/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GACCGCCACCTCA--
-TCCGCCCCCGCATT
 A T C G C G T A A G T C A G T C A T C G A G T C A G T C C T G A A G T C A G T C A C G T G T A C T C G A A C G T A C G T
A C G T G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GACCGCCACCTCA--
GGTCCCGCCCCCTTCTC
 A C G T A C G T A T C G C G T A A G T C A G T C A T C G A G T C A G T C C T G A A G T C A G T C A C G T G T A C T C G A A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

CREB3L1/MA0839.1/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GACCGCCACCTCA---
--ATGCCACGTCATCA
 A T C G C G T A A G T C A G T C A T C G A G T C A G T C C T G A A G T C A G T C A C G T G T A C T C G A A C G T A C G T A C G T
A C G T A C G T T C G A G A C T C T A G G T A C G A T C C T G A A T G C T C A G C G A T T G A C C T G A A G C T G A T C C T G A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GACCGCCACCTCA
CTGTCTGTCACCT--
 A C G T A C G T A T C G C G T A A G T C A G T C A T C G A G T C A G T C C T G A A G T C A G T C A C G T G T A C T C G A
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GACCGCCACCTCA
CCCCCGCCCCCGCC
 A C G T A T C G C G T A A G T C A G T C A T C G A G T C A G T C C T G A A G T C A G T C A C G T G T A C T C G A
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GACCGCCACCTCA
TGTCTGDCACCT--
 A C G T A T C G C G T A A G T C A G T C A T C G A G T C A G T C C T G A A G T C A G T C A C G T G T A C T C G A
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GACCGCCACCTCA--
NNGGCGACACCTCNNN
 A C G T A T C G C G T A A G T C A G T C A T C G A G T C A G T C C T G A A G T C A G T C A C G T G T A C T C G A A C G T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

CREB3/MA0638.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GACCGCCACCTCA---
--GTGCCACGTCATCA
 A T C G C G T A A G T C A G T C A T C G A G T C A G T C C T G A A G T C A G T C A C G T G T A C T C G A A C G T A C G T A C G T
A C G T A C G T T C A G A G C T C A T G G T A C A T G C C G T A A G T C C T A G G A C T T G A C C T G A A G C T G T A C T C G A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GACCGCCACCTCA
---TGACACCT--
 A T C G C G T A A G T C A G T C A T C G A G T C A G T C C T G A A G T C A G T C A C G T G T A C T C G A
A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GACCGCCACCTCA-
GCCCCGCCCCCTCCC
 A C G T A T C G C G T A A G T C A G T C A T C G A G T C A G T C C T G A A G T C A G T C A C G T G T A C T C G A A C G T
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C