p-value: | 1e-3 |
log p-value: | -7.550e+00 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 2.0 |
Percentage of Target Sequences with motif | 0.25% |
Number of Background Sequences with motif | 2.4 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 43.7 +/- 7.7bp |
Average Position of motif in Background | 46.3 +/- 21.6bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.50 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 1 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CAGACTACAGCAC BCAGACWA------ |
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RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer
Match Rank: | 2 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CAGACTACAGCAC -AAACCACAGC-- |
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RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer
Match Rank: | 3 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CAGACTACAGCAC NAAACCACAG--- |
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PB0122.1_Foxk1_2/Jaspar
Match Rank: | 4 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CAGACTACAGCAC-- CAAACAACAACACCT |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 5 |
Score: | 0.55 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CAGACTACAGCAC CCAGACRSVB---- |
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RUNX1/MA0002.2/Jaspar
Match Rank: | 6 |
Score: | 0.54 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CAGACTACAGCAC -AAACCACAGAN- |
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RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer
Match Rank: | 7 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CAGACTACAGCAC NWAACCACADNN- |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 8 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CAGACTACAGCAC CCAGACAG------ |
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Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer
Match Rank: | 9 |
Score: | 0.54 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CAGACTACAGCAC--------- --RACTACAACTCCCAGVAKGC |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------CAGACTACAGCAC CAAATCCAGACATCACA-- |
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