Information for 24-CTCTTGCTTTTCT (Motif 52)

A G T C A G C T A G T C A C G T A C G T A C T G A G T C A G C T C G A T A C G T A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A C G T A C G T A C T G A C T A G A G T C C G T A C G T A A C T G C T G A A C T G
p-value:1e-6
log p-value:-1.413e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.8 +/- 27.3bp
Average Position of motif in Background83.4 +/- 12.1bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTCTTGCTTTTCT
-ACTTTCGTTTCT
 A G T C A G C T A G T C A C G T A C G T A C T G A G T C A G C T C G A T A C G T A C G T A G T C A C G T
A C G T T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T

PB0146.1_Mafk_2/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTCTTGCTTTTCT---
-CCTTGCAATTTTTNN
 A G T C A G C T A G T C A C G T A C G T A C T G A G T C A G C T C G A T A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTCTTGCTTTTCT
NNACTTGCCTT---
 A C G T A G T C A G C T A G T C A C G T A C G T A C T G A G T C A G C T C G A T A C G T A C G T A G T C A C G T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CTCTTGCTTTTCT--
----TTCTTATCTGT
 A G T C A G C T A G T C A C G T A C G T A C T G A G T C A G C T C G A T A C G T A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A G C T A G T C A G C T A C G T C G T A A C G T A G T C C G A T A T C G G A C T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:5
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CTCTTGCTTTTCT-
----NNCTTATCTN
 A G T C A G C T A G T C A C G T A C G T A C T G A G T C A G C T C G A T A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C

ONECUT3/MA0757.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTCTTGCTTTTCT
NTTATTGATTTTTT
 A C G T A G T C A G C T A G T C A C G T A C G T A C T G A G T C A G C T C G A T A C G T A C G T A G T C A C G T
C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T

PB0119.1_Foxa2_2/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CTCTTGCTTTTCT-
NCNTTTGTTATTTNN
 A C G T A G T C A G C T A G T C A C G T A C G T A C T G A G T C A G C T C G A T A C G T A C G T A G T C A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CTCTTGCTTTTCT-
----NCCTTATCTG
 A G T C A G C T A G T C A C G T A C G T A C T G A G T C A G C T C G A T A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G

GATA3/MA0037.2/Jaspar

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CTCTTGCTTTTCT
-----TCTTATCT
 A G T C A G C T A G T C A C G T A C G T A C T G A G T C A G C T C G A T A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:10
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CTCTTGCTTTTCT--
-----YCTTATCTBN
 A G T C A G C T A G T C A C G T A C G T A C T G A G T C A G C T C G A T A C G T A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C