Information for 23-GCAGATCTCATCC (Motif 51)

A C T G A G T C C G T A A C T G C G T A A C G T A G T C A C G T A G T C C G T A A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C G T A C T G C G T A A C T G C G T A A C G T A G T C A C G T A C T G A G T C
p-value:1e-6
log p-value:-1.414e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.0 +/- 23.7bp
Average Position of motif in Background48.8 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCAGATCTCATCC------
NDBAGATRWTATCTVNNNNN
 A C G T A C T G A G T C C G T A A C T G C G T A A C G T A G T C A C G T A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C A G T A T G C C G T A A C T G C G T A A C G T T C G A G C T A G A C T C G T A A C G T A G T C C G A T T A C G G C A T A G C T G A T C G A C T G A C T

PB0125.1_Gata3_2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GCAGATCTCATCC-----
TTTTGTAGATTTTATCGACTTA
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G C G T A A C G T A G T C A C G T A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
G A C T A C G T G C A T C A G T T C A G A G C T G C T A C T A G G C T A G A C T C G A T A C G T G A C T C T G A A C G T G A T C C T A G T C G A A T G C C G A T G C A T G T C A

PB0126.1_Gata5_2/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GCAGATCTCATCC-
GACAGAGATATCAGTGT
 A C G T A C G T A C G T A C T G A G T C C G T A A C T G C G T A A C G T A G T C A C G T A G T C C G T A A C G T A G T C A G T C A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCAGATCTCATCC
-ATGACGTCATCN
 A C T G A G T C C G T A A C T G C G T A A C G T A G T C A C G T A G T C C G T A A C G T A G T C A G T C
A C G T T C G A G C A T A C T G C T G A A G T C T C A G G A C T G T A C C G T A A G C T A G T C G A T C

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:5
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GCAGATCTCATCC
-----GCTAATCC
 A C T G A G T C C G T A A C T G C G T A A C G T A G T C A C G T A G T C C G T A A C G T A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C

RHOXF1/MA0719.1/Jaspar

Match Rank:6
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GCAGATCTCATCC-
------ATAATCCC
 A C T G A G T C C G T A A C T G C G T A A C G T A G T C A C G T A G T C C G T A A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C

GSC2/MA0891.1/Jaspar

Match Rank:7
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GCAGATCTCATCC--
-----CCTAATCCGC
 A C T G A G T C C G T A A C T G C G T A A C G T A G T C A C G T A G T C C G T A A C G T A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

PH0124.1_Obox5_1/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GCAGATCTCATCC-----
-NANANTTAATCCCNNNN
 A C T G A G T C C G T A A C T G C G T A A C G T A G T C A C G T A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A

Pitx1/MA0682.1/Jaspar

Match Rank:9
Score:0.52
Offset:6
Orientation:forward strand
Alignment:GCAGATCTCATCC-
------TTAATCCC
 A C T G A G T C C G T A A C T G C G T A A C G T A G T C A C G T A G T C C G T A A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C

GSC/MA0648.1/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GCAGATCTCATCC--
-----GCTAATCCCC
 A C T G A G T C C G T A A C T G C G T A A C G T A G T C A C G T A G T C C G T A A C G T A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C