Information for 9-GACCGCGCTA (Motif 44)

A T C G C T G A A G T C A T G C A C T G A G T C A T C G A G T C C G A T T G C A
Reverse Opposite:
A C G T G C T A A C T G A T G C A C T G A G T C A T C G A C T G A G C T A T G C
p-value:1e-7
log p-value:-1.751e+01
Information Content per bp:1.851
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif52.2
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets50.3 +/- 23.3bp
Average Position of motif in Background46.5 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GACCGCGCTA
-AGCGCGCC-
 A T C G C T G A A G T C A T G C A C T G A G T C A T C G A G T C C G A T T G C A
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T

GLI2/MA0734.1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GACCGCGCTA
GCGACCACACTG
 A C G T A C G T A T C G C T G A A G T C A T G C A C T G A G T C A T C G A G T C C G A T T G C A
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

PB0157.1_Rara_2/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GACCGCGCTA-
NNCNTGACCCCGCTCT
 A C G T A C G T A C G T A C G T A C G T A T C G C T G A A G T C A T G C A C T G A G T C A T C G A G T C C G A T T G C A A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GACCGCGCTA-----
-GCCGCGCAGTGCGT
 A T C G C T G A A G T C A T G C A C T G A G T C A T C G A G T C C G A T T G C A A C G T A C G T A C G T A C G T A C G T
A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

PB0112.1_E2F2_2/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GACCGCGCTA-----
CCTTCGGCGCCAAAAGG
 A C G T A C G T A T C G C T G A A G T C A T G C A C T G A G T C A T C G A G T C C G A T T G C A A C G T A C G T A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

PB0113.1_E2F3_2/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GACCGCGCTA-----
AGCTCGGCGCCAAAAGC
 A C G T A C G T A T C G C T G A A G T C A T G C A C T G A G T C A T C G A G T C C G A T T G C A A C G T A C G T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

HINFP/MA0131.2/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GACCGCGCTA
CAACGTCCGCGG--
 A C G T A C G T A C G T A C G T A T C G C T G A A G T C A T G C A C T G A G T C A T C G A G T C C G A T T G C A
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GACCGCGCTA-
ATAAAGGCGCGCGAT
 A C G T A C G T A C G T A C G T A T C G C T G A A G T C A T G C A C T G A G T C A T C G A G T C C G A T T G C A A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GACCGCGCTA
GAGSCCGAGC--
 A C G T A C G T A T C G C T G A A G T C A T G C A C T G A G T C A T C G A G T C C G A T T G C A
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GACCGCGCTA--
TATCGACCCCCCACAG
 A C G T A C G T A C G T A C G T A T C G C T G A A G T C A T G C A C T G A G T C A T C G A G T C C G A T T G C A A C G T A C G T
G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G