Information for 18-CAGTGCYCAKTGCCTV (Motif 35)

A G T C T C G A C T A G A C G T A T C G A G T C A G C T A G T C C G T A A C T G C A G T A T C G A G T C G T A C A C G T T C G A
Reverse Opposite:
A G C T T C G A A C T G A C T G T A G C G C T A T G A C G C A T A C T G T C G A A C T G A T G C G T C A A G T C A C G T A C T G
p-value:1e-8
log p-value:-2.020e+01
Information Content per bp:1.706
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif39.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets59.2 +/- 21.4bp
Average Position of motif in Background55.4 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----CAGTGCYCAKTGCCTV
CGAACAGTGCTCACTAT---
 A C G T A C G T A C G T A C G T A G T C T C G A C T A G A C G T A T C G A G T C A G C T A G T C C G T A A C T G C A G T A T C G A G T C G T A C A C G T T C G A
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CAGTGCYCAKTGCCTV
--ATGCCCACC-----
 A G T C T C G A C T A G A C G T A T C G A G T C A G C T A G T C C G T A A C T G C A G T A T C G A G T C G T A C A C G T T C G A
A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CAGTGCYCAKTGCCTV
GGGTGTGCCCAAAAGG--
 A C G T A C G T A G T C T C G A C T A G A C G T A T C G A G T C A G C T A G T C C G T A A C T G C A G T A T C G A G T C G T A C A C G T T C G A
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------CAGTGCYCAKTGCCTV
NNNANTGCAGTGCNNTT------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T C G A C T A G A C G T A T C G A G T C A G C T A G T C C G T A A C T G C A G T A T C G A G T C G T A C A C G T T C G A
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CAGTGCYCAKTGCCTV
---TGCCCAGNHW---
 A G T C T C G A C T A G A C G T A T C G A G T C A G C T A G T C C G T A A C T G C A G T A T C G A G T C G T A C A C G T T C G A
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:6
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----CAGTGCYCAKTGCCTV
NTNTATGTGCACATNNN---
 A C G T A C G T A C G T A C G T A G T C T C G A C T A G A C G T A T C G A G T C A G C T A G T C C G T A A C T G C A G T A T C G A G T C G T A C A C G T T C G A
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CAGTGCYCAKTGCCTV
CNGTCCTCCC------
 A G T C T C G A C T A G A C G T A T C G A G T C A G C T A G T C C G T A A C T G C A G T A T C G A G T C G T A C A C G T T C G A
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CAGTGCYCAKTGCCTV
CTTGGCANNNTGCCAA
 A G T C T C G A C T A G A C G T A T C G A G T C A G C T A G T C C G T A A C T G C A G T A T C G A G T C G T A C A C G T T C G A
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:9
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CAGTGCYCAKTGCCTV
TTAAGTGCTT--------
 A C G T A C G T A G T C T C G A C T A G A C G T A T C G A G T C A G C T A G T C C G T A A C T G C A G T A T C G A G T C G T A C A C G T T C G A
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:10
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----CAGTGCYCAKTGCCTV
NNGTATGTGCACATNNN---
 A C G T A C G T A C G T A C G T A G T C T C G A C T A G A C G T A T C G A G T C A G C T A G T C C G T A A C T G C A G T A T C G A G T C G T A C A C G T T C G A
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G A C G T A C G T A C G T