Information for 17-CTCTCGMTCMKSKCCY (Motif 34)

A G T C A G C T A G T C A G C T A G T C A C T G T G A C A G C T A G T C G T C A A C T G A T G C A C T G A G T C A G T C A G T C
Reverse Opposite:
T C A G A C T G A C T G T G A C A T C G G T A C A C G T A C T G C T G A A C T G T G A C A C T G C T G A A C T G C T G A C T A G
p-value:1e-8
log p-value:-2.059e+01
Information Content per bp:1.832
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.2 +/- 11.1bp
Average Position of motif in Background37.0 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CTCTCGMTCMKSKCCY
NNAATTCTCGNTNAN-----
 A C G T A C G T A C G T A C G T A G T C A G C T A G T C A G C T A G T C A C T G T G A C A G C T A G T C G T C A A C T G A T G C A C T G A G T C A G T C A G T C
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CTCTCGMTCMKSKCCY
ACCACTCTCGGTCAC-----
 A C G T A C G T A C G T A C G T A G T C A G C T A G T C A G C T A G T C A C T G T G A C A G C T A G T C G T C A A C T G A T G C A C T G A G T C A G T C A G T C
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C A C G T A C G T A C G T A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CTCTCGMTCMKSKCCY
AGTATTCTCGGTTGC-----
 A C G T A C G T A C G T A C G T A G T C A G C T A G T C A G C T A G T C A C T G T G A C A G C T A G T C G T C A A C T G A T G C A C T G A G T C A G T C A G T C
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C A C G T A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:4
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CTCTCGMTCMKSKCCY
GSCTGTCACTCA------
 A C G T A C G T A G T C A G C T A G T C A G C T A G T C A C T G T G A C A G C T A G T C G T C A A C T G A T G C A C T G A G T C A G T C A G T C
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTCTCGMTCMKSKCCY
NCTGTCAATCAN-----
 A C G T A G T C A G C T A G T C A G C T A G T C A C T G T G A C A G C T A G T C G T C A A C T G A T G C A C T G A G T C A G T C A G T C
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T A C G T A C G T A C G T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:6
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CTCTCGMTCMKSKCCY
NTATYGATCH------
 A G T C A G C T A G T C A G C T A G T C A C T G T G A C A G C T A G T C G T C A A C T G A T G C A C T G A G T C A G T C A G T C
C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:7
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CTCTCGMTCMKSKCCY
SCTGTCAVTCAV-----
 A C G T A G T C A G C T A G T C A G C T A G T C A C T G T G A C A G C T A G T C G T C A A C T G A T G C A C T G A G T C A G T C A G T C
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-CTCTCGMTCMKSKCCY
GCTCGGSCTC-------
 A C G T A G T C A G C T A G T C A G C T A G T C A C T G T G A C A G C T A G T C G T C A A C T G A T G C A C T G A G T C A G T C A G T C
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:9
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--CTCTCGMTCMKSKCCY
NNTTCCCGCCC-------
 A C G T A C G T A G T C A G C T A G T C A G C T A G T C A C T G T G A C A G C T A G T C G T C A A C T G A T G C A C T G A G T C A G T C A G T C
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--CTCTCGMTCMKSKCCY
NSCACTYVAV--------
 A C G T A C G T A G T C A G C T A G T C A G C T A G T C A C T G T G A C A G C T A G T C G T C A A C T G A T G C A C T G A G T C A G T C A G T C
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T