Information for 5-CCGGGCCAVACGT (Motif 13)

A G T C A G T C A C T G A C T G A C T G A G T C A T G C C G T A T A G C G T C A A G T C A C T G A G C T
Reverse Opposite:
T C G A A G T C C T A G A C G T A C T G A C G T A T C G A C T G A G T C A G T C A G T C A C T G A C T G
p-value:1e-10
log p-value:-2.486e+01
Information Content per bp:1.869
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.6 +/- 20.4bp
Average Position of motif in Background49.1 +/- 14.5bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCGGGCCAVACGT
CGCGCCGGGTCACGTA-
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C T G A C T G A G T C A T G C C G T A T A G C G T C A A G T C A C T G A G C T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCGGGCCAVACGT-----
-AAGGCCAGATGGTCCGG
 A G T C A G T C A C T G A C T G A C T G A G T C A T G C C G T A T A G C G T C A A G T C A C T G A G C T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCGGGCCAVACGT--
GTAGGGCAAAGGTCA
 A G T C A G T C A C T G A C T G A C T G A G T C A T G C C G T A T A G C G T C A A G T C A C T G A G C T A C G T A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CCGGGCCAVACGT-
----TCCAGATGTT
 A G T C A G T C A C T G A C T G A C T G A G T C A T G C C G T A T A G C G T C A A G T C A C T G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CCGGGCCAVACGT--
-TGGGGCAAAGGTCA
 A G T C A G T C A C T G A C T G A C T G A G T C A T G C C G T A T A G C G T C A A G T C A C T G A G C T A C G T A C G T
A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CCGGGCCAVACGT
TNNGGGCAG-----
 A C G T A G T C A G T C A C T G A C T G A C T G A G T C A T G C C G T A T A G C G T C A A G T C A C T G A G C T
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CCGGGCCAVACGT-
----ACCATATGTT
 A G T C A G T C A C T G A C T G A C T G A G T C A T G C C G T A T A G C G T C A A G T C A C T G A G C T A C G T
A C G T A C G T A C G T A C G T C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CCGGGCCAVACGT--
-TAGGGCAAAGGTCA
 A G T C A G T C A C T G A C T G A C T G A G T C A T G C C G T A T A G C G T C A A G T C A C T G A G C T A C G T A C G T
A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CCGGGCCAVACGT
WDNCTGGGCA------
 A C G T A C G T A C G T A G T C A G T C A C T G A C T G A C T G A G T C A T G C C G T A T A G C G T C A A G T C A C T G A G C T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

NEUROD2/MA0668.1/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CCGGGCCAVACGT-
----GCCATATGGT
 A G T C A G T C A C T G A C T G A C T G A G T C A T G C C G T A T A G C G T C A A G T C A C T G A G C T A C G T
A C G T A C G T A C G T A C G T T C A G T G A C A T G C C T G A A G C T T G C A A G C T A C T G A C T G G A C T