Information for 5-SCTCKCCKGGGGCAAM (Motif 11)

A T G C A G T C A C G T A G T C A C G T A T G C A G T C A C T G A C T G A C T G A C T G A C T G A G T C C G T A C T G A G T A C
Reverse Opposite:
A C T G A G C T A C G T A C T G A G T C A G T C A G T C G T A C G T A C A C T G A T C G G T C A A C T G C G T A A C T G A T C G
p-value:1e-11
log p-value:-2.536e+01
Information Content per bp:1.881
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.3 +/- 26.3bp
Average Position of motif in Background16.7 +/- 2.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:SCTCKCCKGGGGCAAM
-NTCCCCTCAGGGANT
 A T G C A G T C A C G T A G T C A C G T A T G C A G T C A C T G A C T G A C T G A C T G A C T G A G T C C G T A C T G A G T A C
A C G T G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:SCTCKCCKGGGGCAAM
-ATTGCCTGAGGCAAT
 A T G C A G T C A C G T A G T C A C G T A T G C A G T C A C T G A C T G A C T G A C T G A C T G A G T C C G T A C T G A G T A C
A C G T G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:SCTCKCCKGGGGCAAM
-NTCGCCTCAGGCAAT
 A T G C A G T C A C G T A G T C A C G T A T G C A G T C A C T G A C T G A C T G A C T G A C T G A G T C C G T A C T G A G T A C
A C G T G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:SCTCKCCKGGGGCAAM
-ANTGCCTGAGGCAAN
 A T G C A G T C A C G T A G T C A C G T A T G C A G T C A C T G A C T G A C T G A C T G A C T G A G T C C G T A C T G A G T A C
A C G T C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

TFAP2A/MA0003.3/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:SCTCKCCKGGGGCAAM
---NGCCTGAGGCN--
 A T G C A G T C A C G T A G T C A C G T A T G C A G T C A C T G A C T G A C T G A C T G A C T G A G T C C G T A C T G A G T A C
A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:SCTCKCCKGGGGCAAM--
-ANTNCCGGGGGGAANTT
 A T G C A G T C A C G T A G T C A C G T A T G C A G T C A C T G A C T G A C T G A C T G A C T G A G T C C G T A C T G A G T A C A C G T A C G T
A C G T C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:SCTCKCCKGGGGCAAM
---TGCCTGAGGCN--
 A T G C A G T C A C G T A G T C A C G T A T G C A G T C A C T G A C T G A C T G A C T G A C T G A G T C C G T A C T G A G T A C
A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:SCTCKCCKGGGGCAAM
CCCCCCCGGGGGNN--
 A T G C A G T C A C G T A G T C A C G T A T G C A G T C A C T G A C T G A C T G A C T G A C T G A G T C C G T A C T G A G T A C
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-SCTCKCCKGGGGCAAM
NCCCCCCCGGGGGGN--
 A C G T A T G C A G T C A C G T A G T C A C G T A T G C A G T C A C T G A C T G A C T G A C T G A C T G A G T C C G T A C T G A G T A C
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:SCTCKCCKGGGGCAAM
--TGCCCTNGGGCA--
 A T G C A G T C A C G T A G T C A C G T A T G C A G T C A C T G A C T G A C T G A C T G A C T G A G T C C G T A C T G A G T A C
A C G T A C G T G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T A C G T