Information for 10-AGGGGATTAA (Motif 47)

C G T A A C T G A C T G C T A G A C T G G T C A A C G T A C G T C G T A G T C A
Reverse Opposite:
A C G T A C G T C G T A C G T A A C G T A G T C A G T C A G T C A G T C A C G T
p-value:1e-5
log p-value:-1.247e+01
Information Content per bp:1.940
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif26.2
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets52.4 +/- 27.1bp
Average Position of motif in Background45.9 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0121.1_Obox1/Jaspar

Match Rank:1
Score:0.89
Offset:-3
Orientation:forward strand
Alignment:---AGGGGATTAA----
TTAAGGGGATTAACTAC
 A C G T A C G T A C G T C G T A A C T G A C T G C T A G A C T G G T C A A C G T A C G T C G T A G T C A A C G T A C G T A C G T A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

PH0129.1_Otx1/Jaspar

Match Rank:2
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--AGGGGATTAA-----
AGAGGGGATTAATTTAT
 A C G T A C G T C G T A A C T G A C T G C T A G A C T G G T C A A C G T A C G T C G T A G T C A A C G T A C G T A C G T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

Crx/MA0467.1/Jaspar

Match Rank:3
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-AGGGGATTAA
AAGAGGATTAG
 A C G T C G T A A C T G A C T G C T A G A C T G G T C A A C G T A C G T C G T A G T C A
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

PH0137.1_Pitx1/Jaspar

Match Rank:4
Score:0.85
Offset:-3
Orientation:forward strand
Alignment:---AGGGGATTAA----
TTAGAGGGATTAACAAT
 A C G T A C G T A C G T C G T A A C T G A C T G C T A G A C T G G T C A A C G T A C G T C G T A G T C A A C G T A C G T A C G T A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

PH0122.1_Obox2/Jaspar

Match Rank:5
Score:0.84
Offset:-3
Orientation:forward strand
Alignment:---AGGGGATTAA----
TGAGGGGGATTAACTAT
 A C G T A C G T A C G T C G T A A C T G A C T G C T A G A C T G G T C A A C G T A C G T C G T A G T C A A C G T A C G T A C G T A C G T
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T

PH0123.1_Obox3/Jaspar

Match Rank:6
Score:0.84
Offset:-3
Orientation:forward strand
Alignment:---AGGGGATTAA----
TGAGGGGGATTAACTAT
 A C G T A C G T A C G T C G T A A C T G A C T G C T A G A C T G G T C A A C G T A C G T C G T A G T C A A C G T A C G T A C G T A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T

PH0124.1_Obox5_1/Jaspar

Match Rank:7
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--AGGGGATTAA-----
TAGAGGGATTAAATTTC
 A C G T A C G T C G T A A C T G A C T G C T A G A C T G G T C A A C G T A C G T C G T A G T C A A C G T A C G T A C G T A C G T A C G T
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

PH0130.1_Otx2/Jaspar

Match Rank:8
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--AGGGGATTAA-----
TGTAGGGATTAATTGTC
 A C G T A C G T C G T A A C T G A C T G C T A G A C T G G T C A A C G T A C G T C G T A G T C A A C G T A C G T A C G T A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

PH0138.1_Pitx2/Jaspar

Match Rank:9
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--AGGGGATTAA-----
TGAAGGGATTAATCATC
 A C G T A C G T C G T A A C T G A C T G C T A G A C T G G T C A A C G T A C G T C G T A G T C A A C G T A C G T A C G T A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

PH0015.1_Crx/Jaspar

Match Rank:10
Score:0.83
Offset:-3
Orientation:forward strand
Alignment:---AGGGGATTAA---
CGTTGGGGATTAGCCT
 A C G T A C G T A C G T C G T A A C T G A C T G C T A G A C T G G T C A A C G T A C G T C G T A G T C A A C G T A C G T A C G T
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T