Information for 22-CTTWCCTCACTCT (Motif 46)

A G T C A C G T A G C T G C A T A G T C A G T C A C G T A T G C C G T A A G T C A C G T A G T C A C G T
Reverse Opposite:
C G T A C T A G C G T A A C T G A C G T A T C G C G T A A C T G A C T G C G A T C T G A C G T A A C T G
p-value:1e-6
log p-value:-1.435e+01
Information Content per bp:1.892
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets72.4 +/- 23.2bp
Average Position of motif in Background19.9 +/- 5.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CTTWCCTCACTCT
NNACTTACCTN-----
 A C G T A C G T A C G T A G T C A C G T A G C T G C A T A G T C A G T C A C G T A T G C C G T A A G T C A C G T A G T C A C G T
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CTTWCCTCACTCT
NNACTTGCCTT-----
 A C G T A C G T A C G T A G T C A C G T A G C T G C A T A G T C A G T C A C G T A T G C C G T A A G T C A C G T A G T C A C G T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTTWCCTCACTCT
-TGACCTYA----
 A G T C A C G T A G C T G C A T A G T C A G T C A C G T A T G C C G T A A G T C A C G T A G T C A C G T
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T

JUND(var.2)/MA0492.1/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CTTWCCTCACTCT-
NATGACATCATCNNN
 A C G T A G T C A C G T A G C T G C A T A G T C A G T C A C G T A T G C C G T A A G T C A C G T A G T C A C G T A C G T
A C T G T C G A A C G T A C T G C T G A A G T C T C G A A C G T G T A C C G T A A G C T A G T C G C A T G A C T G C A T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTTWCCTCACTCT
ATTGCATCAT---
 A G T C A C G T A G C T G C A T A G T C A G T C A C G T A T G C C G T A A G T C A C G T A G T C A C G T
T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:6
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CTTWCCTCACTCT
--TTCCTCT----
 A G T C A C G T A G C T G C A T A G T C A G T C A C G T A T G C C G T A A G T C A C G T A G T C A C G T
A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T A C G T A C G T A C G T A C G T

JUN/MA0488.1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CTTWCCTCACTCT
ATGACATCATCNN
 A G T C A C G T A G C T G C A T A G T C A G T C A C G T A T G C C G T A A G T C A C G T A G T C A C G T
T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T

CREB1/MA0018.2/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CTTWCCTCACTCT
-TGACGTCA----
 A G T C A C G T A G C T G C A T A G T C A G T C A C G T A T G C C G T A A G T C A C G T A G T C A C G T
A C G T G C A T A C T G C T G A A G T C A T C G A C G T A T G C T C G A A C G T A C G T A C G T A C G T

Gata4/MA0482.1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CTTWCCTCACTCT
TCTTATCTCCC---
 A C G T A G T C A C G T A G C T G C A T A G T C A G T C A C G T A T G C C G T A A G T C A C G T A G T C A C G T
A G C T A T G C A G C T A C G T G T C A A C G T A G T C C G A T A T G C G A T C A G T C A C G T A C G T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CTTWCCTCACTCT
ATCACCCCAC---
 A G T C A C G T A G C T G C A T A G T C A G T C A C G T A T G C C G T A A G T C A C G T A G T C A C G T
T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T A C G T A C G T