Information for 19-GTCCCSACTGCAG (Motif 43)

A C T G A C G T A G T C A T G C A G T C A T C G T C G A A G T C A C G T A C T G A G T C C G T A C T A G
Reverse Opposite:
A G T C A C G T A C T G A G T C C G T A A C T G A C G T A T G C A C T G A T C G C T A G G T C A A G T C
p-value:1e-6
log p-value:-1.606e+01
Information Content per bp:1.839
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif7.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.8 +/- 19.0bp
Average Position of motif in Background52.0 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GTCCCSACTGCAG----
AATCGCACTGCATTCCG
 A C T G A C G T A G T C A T G C A G T C A T C G T C G A A G T C A C G T A C T G A G T C C G T A C T A G A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

MTF1/MA0863.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTCCCSACTGCAG-
GTGCCGTGTGCAAA
 A C T G A C G T A G T C A T G C A G T C A T C G T C G A A G T C A C G T A C T G A G T C C G T A C T A G A C G T
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GTCCCSACTGCAG--
---CCCCCTGCTGTG
 A C T G A C G T A G T C A T G C A G T C A T C G T C G A A G T C A C G T A C T G A G T C C G T A C T A G A C G T A C G T
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GTCCCSACTGCAG
-SNGCACCTGCHS
 A C T G A C G T A G T C A T G C A G T C A T C G T C G A A G T C A C G T A C T G A G T C C G T A C T A G
A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

PB0150.1_Mybl1_2/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GTCCCSACTGCAG--
CGACCAACTGCCGTG
 A C T G A C G T A G T C A T G C A G T C A T C G T C G A A G T C A C G T A C T G A G T C C G T A C T A G A C G T A C G T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GTCCCSACTGCAG--
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A T G C A G T C A T C G T C G A A G T C A C G T A C T G A G T C C G T A C T A G A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GTCCCSACTGCAG---
-GGCCYCCTGCTGDGH
 A C T G A C G T A G T C A T G C A G T C A T C G T C G A A G T C A C G T A C T G A G T C C G T A C T A G A C G T A C G T A C G T
A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0044.1_Mtf1_1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GTCCCSACTGCAG---
GGGCCGTGTGCAAAAA
 A C T G A C G T A G T C A T G C A G T C A T C G T C G A A G T C A C G T A C T G A G T C C G T A C T A G A C G T A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

NHLH1/MA0048.2/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GTCCCSACTGCAG
--CGCAGCTGCG-
 A C T G A C G T A G T C A T G C A G T C A T C G T C G A A G T C A C G T A C T G A G T C C G T A C T A G
A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GTCCCSACTGCAG
-NNACAGCTGC--
 A C T G A C G T A G T C A T G C A G T C A T C G T C G A A G T C A C G T A C T G A G T C C G T A C T A G
A C G T C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T