Information for 21-AGAGAGAAAGAAAGAA (Motif 40)

C G T A A C T G C G T A A C T G C G T A C T A G C G T A C T G A C G T A A C T G G T C A C G T A C T G A A C T G C G T A C T G A
Reverse Opposite:
A G C T A C G T A G T C A G C T A C G T A C G T A G T C A C G T A G C T A C G T A G T C A C G T A G T C A C G T A G T C A C G T
p-value:1e-7
log p-value:-1.716e+01
Information Content per bp:1.906
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.0 +/- 9.3bp
Average Position of motif in Background71.9 +/- 4.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGAGAGAAAGAAAGAA
AAACAGACAAAGGAAT--
 A C G T A C G T C G T A A C T G C G T A A C T G C G T A C T A G C G T A C T G A C G T A A C T G G T C A C G T A C T G A A C T G C G T A C T G A
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGAGAGAAAGAAAGAA
GAAAGTGAAAGT-----
 A C G T C G T A A C T G C G T A A C T G C G T A C T A G C G T A C T G A C G T A A C T G G T C A C G T A C T G A A C T G C G T A C T G A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGAGAGAAAGAAAGAA---
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T C G T A A C T G C G T A A C T G C G T A C T A G C G T A C T G A C G T A A C T G G T C A C G T A C T G A A C T G C G T A C T G A A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

PRDM1/MA0508.1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGAGAGAAAGAAAGAA
AGAAAGTGAAAGTGA---
 A C G T A C G T C G T A A C T G C G T A A C T G C G T A C T A G C G T A C T G A C G T A A C T G G T C A C G T A C T G A A C T G C G T A C T G A
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A A C G T A C G T A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AGAGAGAAAGAAAGAA
BAGTCATANTGAAAG--
 A C G T C G T A A C T G C G T A A C T G C G T A C T A G C G T A C T G A C G T A A C T G G T C A C G T A C T G A A C T G C G T A C T G A
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G A C G T A C G T

IRF2/MA0051.1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGAGAGAAAGAAAGAA
GGAAAGCGAAACCAAAAC
 A C G T A C G T C G T A A C T G C G T A A C T G C G T A C T A G C G T A C T G A C G T A A C T G G T C A C G T A C T G A A C T G C G T A C T G A
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AGAGAGAAAGAAAGAA
WNAGTCADAVTGAAACTN
 A C G T A C G T C G T A A C T G C G T A A C T G C G T A C T A G C G T A C T G A C G T A A C T G G T C A C G T A C T G A A C T G C G T A C T G A
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AGAGAGAAAGAAAGAA
---GAAAGTGAAAGT-
 C G T A A C T G C G T A A C T G C G T A C T A G C G T A C T G A C G T A A C T G G T C A C G T A C T G A A C T G C G T A C T G A
A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGAGAGAAAGAAAGAA--
GGAAGGAAGGAAGGAAGG
 C G T A A C T G C G T A A C T G C G T A C T A G C G T A C T G A C G T A A C T G G T C A C G T A C T G A A C T G C G T A C T G A A C G T A C G T
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

Gata1/MA0035.3/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AGAGAGAAAGAAAGAA
ANAGATAAGAA-----
 C G T A A C T G C G T A A C T G C G T A C T A G C G T A C T G A C G T A A C T G G T C A C G T A C T G A A C T G C G T A C T G A
C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T A C G T A C G T A C G T A C G T