Information for 8-AGTGTGTGAG (Motif 39)

G T C A C T A G A C G T C T A G G A C T A C T G A G C T A T C G C G T A T C A G
Reverse Opposite:
A G T C C G A T A T G C T C G A G T A C C T G A A G T C G T C A A G T C C A G T
p-value:1e-8
log p-value:-1.880e+01
Information Content per bp:1.830
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.79%
Number of Background Sequences with motif258.2
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets55.7 +/- 25.2bp
Average Position of motif in Background52.0 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---AGTGTGTGAG---
NNGCGTGTGTGCNGCN
 A C G T A C G T A C G T G T C A C T A G A C G T C T A G G A C T A C T G A G C T A T C G C G T A T C A G A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

MGA/MA0801.1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AGTGTGTGAG
-AGGTGTGA-
 G T C A C T A G A C G T C T A G G A C T A C T G A G C T A T C G C G T A T C A G
A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T

TBX1/MA0805.1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AGTGTGTGAG
-AGGTGTGA-
 G T C A C T A G A C G T C T A G G A C T A C T G A G C T A T C G C G T A T C A G
A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGTGTGTGAG
AAGGTGTKAA
 G T C A C T A G A C G T C T A G G A C T A C T G A G C T A T C G C G T A T C A G
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A

EOMES/MA0800.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGTGTGTGAG---
AAGGTGTGAAAAT
 G T C A C T A G A C G T C T A G G A C T A C T G A G C T A T C G C G T A T C A G A C G T A C G T A C G T
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

TBX21/MA0690.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGTGTGTGAG
AAGGTGTGAA
 G T C A C T A G A C G T C T A G G A C T A C T G A G C T A T C G C G T A T C A G
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A

PB0013.1_Eomes_1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGTGTGTGAG----
GAAAAGGTGTGAAAATT
 A C G T A C G T A C G T G T C A C T A G A C G T C T A G G A C T A C T G A G C T A T C G C G T A T C A G A C G T A C G T A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

TBX2/MA0688.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGTGTGTGAG-
AAGGTGTGAAA
 G T C A C T A G A C G T C T A G G A C T A C T G A G C T A T C G C G T A T C A G A C G T
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

TBX15/MA0803.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGTGTGTGAG
-AGGTGTGA-
 G T C A C T A G A C G T C T A G G A C T A C T G A G C T A T C G C G T A T C A G
A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T

TBX4/MA0806.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGTGTGTGAG
-AGGTGTGA-
 G T C A C T A G A C G T C T A G G A C T A C T G A G C T A T C G C G T A T C A G
A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T