Information for 10-GGTGASTKCACTGAGT (Motif 11)

A C T G A C T G C G A T T C A G C T G A A T G C C A G T A C G T A G T C T G C A G A T C G A C T C T A G C G T A A T C G A C G T
Reverse Opposite:
T C G A T A G C G A C T G A T C C T G A C T A G A C G T T C A G T G C A G T C A A T C G G A C T A G T C C G T A A G T C A G T C
p-value:1e-11
log p-value:-2.756e+01
Information Content per bp:1.615
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif8.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets40.1 +/- 19.7bp
Average Position of motif in Background40.4 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGTGASTKCACTGAGT
CAGGTAAGTAT-------
 A C G T A C G T A C T G A C T G C G A T T C A G C T G A A T G C C A G T A C G T A G T C T G C A G A T C G A C T C T A G C G T A A T C G A C G T
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:2
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGTGASTKCACTGAGT
CGGTGACGTCAC-----
 A C G T A C T G A C T G C G A T T C A G C T G A A T G C C A G T A C G T A G T C T G C A G A T C G A C T C T A G C G T A A T C G A C G T
A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C A C G T A C G T A C G T A C G T A C G T

Vdr/MA0693.1/Jaspar

Match Rank:3
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GGTGASTKCACTGAGT---
---GAGTTCATTGAGTTCA
 A C T G A C T G C G A T T C A G C T G A A T G C C A G T A C G T A G T C T G C A G A T C G A C T C T A G C G T A A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T C G A C A T G A C G T A C G T A G T C C T G A G A C T G A C T T C A G T C G A C T A G A C G T A C G T A G T C C T G A

PB0004.1_Atf1_1/Jaspar

Match Rank:4
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GGTGASTKCACTGAGT
ACGATGACGTCATCGA--
 A C G T A C G T A C T G A C T G C G A T T C A G C T G A A T G C C A G T A C G T A G T C T G C A G A T C G A C T C T A G C G T A A T C G A C G T
C G T A A G T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T G T A C C T A G C T G A A C G T A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:5
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GGTGASTKCACTGAGT------
--NGAGGTCANNGAGTTCANNN
 A C T G A C T G C G A T T C A G C T G A A T G C C A G T A C G T A G T C T G C A G A T C G A C T C T A G C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GGTGASTKCACTGAGT
NGATGACGTCAT-----
 A C G T A C T G A C T G C G A T T C A G C T G A A T G C C A G T A C G T A G T C T G C A G A T C G A C T C T A G C G T A A T C G A C G T
C T A G T C A G T C G A C G A T C A T G C T G A A G T C T C A G G A C T T G A C C G T A A G C T A C G T A C G T A C G T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:7
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GGTGASTKCACTGAGT
NAGGTCANTGACCT----
 A C G T A C G T A C T G A C T G C G A T T C A G C T G A A T G C C A G T A C G T A G T C T G C A G A T C G A C T C T A G C G T A A T C G A C G T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GGTGASTKCACTGAGT
AGGTCA-----------
 A C G T A C T G A C T G C G A T T C A G C T G A A T G C C A G T A C G T A G T C T G C A G A T C G A C T C T A G C G T A A T C G A C G T
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GGTGASTKCACTGAGT
CAGGTGAGG---------
 A C G T A C G T A C T G A C T G C G A T T C A G C T G A A T G C C A G T A C G T A G T C T G C A G A T C G A C T C T A G C G T A A T C G A C G T
A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0038.1_Jundm2_1/Jaspar

Match Rank:10
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--GGTGASTKCACTGAGT
NCGATGACGTCATCGN--
 A C G T A C G T A C T G A C T G C G A T T C A G C T G A A T G C C A G T A C G T A G T C T G C A G A T C G A C T C T A G C G T A A T C G A C G T
C T G A A G T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T T G A C C T G A A G C T T G A C T A C G T A C G A C G T A C G T