Information for 25-TGTATATTGTGTG (Motif 38)

A C G T A C T G A C G T C T G A A C G T C G T A A G C T C G A T C A T G A C G T A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A G T A C C G T A G T A C C G T A C T G A A C G T C G T A A G C T C G T A A G T C C G T A
p-value:1e-1
log p-value:-4.365e+00
Information Content per bp:1.932
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets12.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TGTATATTGTGTG-----
--NNNNTTGTGTGCTTNN
 A C G T A C T G A C G T C T G A A C G T C G T A A G C T C G A T C A T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

FOXH1/MA0479.1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGTATATTGTGTG
TGTGGATTNNN--
 A C G T A C T G A C G T C T G A A C G T C G T A A G C T C G A T C A T G A C G T A C T G A C G T A C T G
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A A C G T A C G T

PB0177.1_Sox7_2/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGTATATTGTGTG--------
GTGCTAATTGTGTGTGTACGCT
 A C G T A C G T A C T G A C G T C T G A A C G T C G T A A G C T C G A T C A T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C T G C G A T T A C G A T G C C G A T G T C A C G T A G C A T G C A T T C A G G C A T T A C G G A C T T A C G G C A T T C A G A C G T C T G A G A T C A C T G T A G C A G C T

PB0168.1_Sox14_2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGTATATTGTGTG--
NNNCCATTGTGTNAN
 A C G T A C T G A C G T C T G A A C G T C G T A A G C T C G A T C A T G A C G T A C T G A C G T A C T G A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGTATATTGTGTG
ATGAATATTC----
 A C G T A C G T A C T G A C G T C T G A A C G T C G T A A G C T C G A T C A T G A C G T A C T G A C G T A C T G
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T A C G T A C G T A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGTATATTGTGTG
CBTGTTTAYAWW---
 A C G T A C G T A C G T A C T G A C G T C T G A A C G T C G T A A G C T C G A T C A T G A C G T A C T G A C G T A C T G
A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T A C G T A C G T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TGTATATTGTGTG
TATTGTTTATT-----
 A C G T A C G T A C G T A C G T A C T G A C G T C T G A A C G T C G T A A G C T C G A T C A T G A C G T A C T G A C G T A C T G
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T A C G T A C G T A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:8
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------TGTATATTGTGTG
NNNNTTTGTTTACNNT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T G A A C G T C G T A A G C T C G A T C A T G A C G T A C T G A C G T A C T G
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TGTATATTGTGTG
--CTCATTGTC--
 A C G T A C T G A C G T C T G A A C G T C G T A A G C T C G A T C A T G A C G T A C T G A C G T A C T G
A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TGTATATTGTGTG
NNTGTGGATTSS---
 A C G T A C G T A C G T A C T G A C G T C T G A A C G T C G T A A G C T C G A T C A T G A C G T A C T G A C G T A C T G
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T A C G T A C G T