p-value: | 1e-6 |
log p-value: | -1.410e+01 |
Information Content per bp: | 1.717 |
Number of Target Sequences with motif | 27.0 |
Percentage of Target Sequences with motif | 4.46% |
Number of Background Sequences with motif | 704.4 |
Percentage of Background Sequences with motif | 1.49% |
Average Position of motif in Targets | 42.3 +/- 24.6bp |
Average Position of motif in Background | 51.4 +/- 27.5bp |
Strand Bias (log2 ratio + to - strand density) | 0.9 |
Multiplicity (# of sites on avg that occur together) | 1.15 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer
Match Rank: | 1 |
Score: | 0.70 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TCTCTWAACC AGGTCTCTAACC- |
|
|
|
NKX3-2/MA0122.2/Jaspar
Match Rank: | 2 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TCTCTWAACC ACCACTTAA-- |
|
|
|
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer
Match Rank: | 3 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TCTCTWAACC BCMATTAG-- |
|
|
|
Nkx3-1/MA0124.2/Jaspar
Match Rank: | 4 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TCTCTWAACC ACCACTTAA-- |
|
|
|
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer
Match Rank: | 5 |
Score: | 0.61 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TCTCTWAACC AASCACTCAA-- |
|
|
|
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer
Match Rank: | 6 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TCTCTWAACC NSCACTYVAV- |
|
|
|
PH0004.1_Nkx3-2/Jaspar
Match Rank: | 7 |
Score: | 0.60 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----TCTCTWAACC-- CATAACCACTTAACAAC |
|
|
|
ISL2/MA0914.1/Jaspar
Match Rank: | 8 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TCTCTWAACC GCACTTAA-- |
|
|
|
PB0048.1_Nkx3-1_1/Jaspar
Match Rank: | 9 |
Score: | 0.59 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----TCTCTWAACC-- CTTAACCACTTAAGGAT |
|
|
|
Nkx2-5(var.2)/MA0503.1/Jaspar
Match Rank: | 10 |
Score: | 0.58 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TCTCTWAACC AGCCACTCAAG- |
|
|
|