Information for 20-KAGCCCCGKGCTG (Motif 33)

A C G T C G T A A C T G G T A C A G T C G A T C T A G C A T C G C A G T A T C G A G T C A C G T A T C G
Reverse Opposite:
A T G C C G T A A C T G T A G C G T C A A T G C A T C G C A T G T C A G A C T G A G T C G A C T G T C A
p-value:1e-6
log p-value:-1.602e+01
Information Content per bp:1.709
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.31%
Number of Background Sequences with motif176.8
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets47.9 +/- 26.3bp
Average Position of motif in Background52.3 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:KAGCCCCGKGCTG---
-GGCCYCCTGCTGDGH
 A C G T C G T A A C T G G T A C A G T C G A T C T A G C A T C G C A G T A T C G A G T C A C G T A T C G A C G T A C G T A C G T
A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:KAGCCCCGKGCTG--
---CCCCCTGCTGTG
 A C G T C G T A A C T G G T A C A G T C G A T C T A G C A T C G C A G T A T C G A G T C A C G T A T C G A C G T A C G T
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:KAGCCCCGKGCTG
-CGCCTCAGGCA-
 A C G T C G T A A C T G G T A C A G T C G A T C T A G C A T C G C A G T A T C G A G T C A C G T A T C G
A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:KAGCCCCGKGCTG
-NGCCTNAGGCN-
 A C G T C G T A A C T G G T A C A G T C G A T C T A G C A T C G C A G T A T C G A G T C A C G T A T C G
A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:KAGCCCCGKGCTG--
-GACCCCCCGCTGTG
 A C G T C G T A A C T G G T A C A G T C G A T C T A G C A T C G C A G T A T C G A G T C A C G T A T C G A C G T A C G T
A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:KAGCCCCGKGCTG
-AGCCTCAGGCA-
 A C G T C G T A A C T G G T A C A G T C G A T C T A G C A T C G C A G T A T C G A G T C A C G T A T C G
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.61
Offset:8
Orientation:reverse strand
Alignment:KAGCCCCGKGCTG
--------NGCTN
 A C G T C G T A A C T G G T A C A G T C G A T C T A G C A T C G C A G T A T C G A G T C A C G T A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.61
Offset:9
Orientation:forward strand
Alignment:KAGCCCCGKGCTG--
---------GCTGTG
 A C G T C G T A A C T G G T A C A G T C G A T C T A G C A T C G C A G T A T C G A G T C A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-KAGCCCCGKGCTG-
NTNGCCTCAGGCNNN
 A C G T A C G T C G T A A C T G G T A C A G T C G A T C T A G C A T C G C A G T A T C G A G T C A C G T A T C G A C G T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----KAGCCCCGKGCTG--
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G G T A C A G T C G A T C T A G C A T C G C A G T A T C G A G T C A C G T A T C G A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C