Information for 5-GCGTCCWRTG (Motif 22)

A C T G A G T C A C T G A C G T A G T C A T G C C G A T T C A G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C C G T A A T C G A C T G G T C A A G T C A C T G A G T C
p-value:1e-8
log p-value:-1.994e+01
Information Content per bp:1.836
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.98%
Number of Background Sequences with motif86.7
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets57.2 +/- 27.7bp
Average Position of motif in Background54.4 +/- 34.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCGTCCWRTG
CAACGTCCGCGG
 A C G T A C G T A C T G A G T C A C T G A C G T A G T C A T G C C G A T T C A G A C G T A C T G
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCGTCCWRTG--
--GTCACGTGGT
 A C T G A G T C A C T G A C G T A G T C A T G C C G A T T C A G A C G T A C T G A C G T A C G T
A C G T A C G T T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCGTCCWRTG--
--GTCACATGAY
 A C T G A G T C A C T G A C G T A G T C A T G C C G A T T C A G A C G T A C T G A C G T A C G T
A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

TFEB/MA0692.1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCGTCCWRTG--
--GTCACGTGAT
 A C T G A G T C A C T G A C G T A G T C A T G C C G A T T C A G A C G T A C T G A C G T A C G T
A C G T A C G T T C A G A C G T T G A C C G T A A G T C T C A G C A G T C A T G T C G A A G C T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCGTCCWRTG
ACTTCCTGTT
 A C T G A G T C A C T G A C G T A G T C A T G C C G A T T C A G A C G T A C T G
T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T

TFEC/MA0871.1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCGTCCWRTG--
--NTCACGTGAT
 A C T G A G T C A C T G A C G T A G T C A T G C C G A T T C A G A C G T A C T G A C G T A C G T
A C G T A C G T T C A G A C G T A G T C C G T A A G T C T C A G C G A T A C T G G T C A A G C T

E-box(bHLH)/Promoter/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCGTCCWRTG-
CCGGTCACGTGA
 A C G T A C T G A G T C A C T G A C G T A G T C A T G C C G A T T C A G A C G T A C T G A C G T
A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A

TFE3/MA0831.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCGTCCWRTG--
--GTCACGTGNT
 A C T G A G T C A C T G A C G T A G T C A T G C C G A T T C A G A C G T A C T G A C G T A C G T
A C G T A C G T C T A G A C G T T G A C C G T A A G T C T C A G C G A T A T C G T C G A A G C T

USF1/MA0093.2/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCGTCCWRTG--
-GGTCACGTGGC
 A C T G A G T C A C T G A C G T A G T C A T G C C G A T T C A G A C G T A C T G A C G T A C G T
A C G T C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C

MF0001.1_ETS_class/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCGTCCWRTG
-CTTCCGGT-
 A C T G A G T C A C T G A C G T A G T C A T G C C G A T T C A G A C G T A C T G
A C G T A G T C C G A T G A C T G A T C G T A C A C T G A T C G G A C T A C G T