Information for 9-AAAGAAGGGCAACAAA (Motif 20)

C G T A C G T A G T C A A T C G C G T A G C T A A C T G A C T G C T A G A T G C C G T A C G T A G T A C C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C T G A C G T A C G T A T C G A G T C A G T C A G T C C G A T A C G T A T G C A C G T A C G T A C G T
p-value:1e-8
log p-value:-2.063e+01
Information Content per bp:1.920
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.5 +/- 13.1bp
Average Position of motif in Background12.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.58
Offset:5
Orientation:forward strand
Alignment:AAAGAAGGGCAACAAA------
-----AGAAGAACAAAGGACTA
 C G T A C G T A G T C A A T C G C G T A G C T A A C T G A C T G C T A G A T G C C G T A C G T A G T A C C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Foxk1/MA0852.1/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AAAGAAGGGCAACAAA---
--AAAATGTAAACAAACAG
 C G T A C G T A G T C A A T C G C G T A G C T A A C T G A C T G C T A G A T G C C G T A C G T A G T A C C G T A C G T A C G T A A C G T A C G T A C G T
A C G T A C G T C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AAAGAAGGGCAACAAA---
--AAAATGTAAACAAACAG
 C G T A C G T A G T C A A T C G C G T A G C T A A C T G A C T G C T A G A T G C C G T A C G T A G T A C C G T A C G T A C G T A A C G T A C G T A C G T
A C G T A C G T C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PH0013.1_Cdx2/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AAAGAAGGGCAACAAA----
----AAAGGTAATAAAATTT
 C G T A C G T A G T C A A T C G C G T A G C T A A C T G A C T G C T A G A T G C C G T A C G T A G T A C C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T

Foxj3/MA0851.1/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AAAGAAGGGCAACAAA---
--AAAAAGTAAACAAACAC
 C G T A C G T A G T C A A T C G C G T A G C T A A C T G A C T G C T A G A T G C C G T A C G T A G T A C C G T A C G T A C G T A A C G T A C G T A C G T
A C G T A C G T G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AAAGAAGGGCAACAAA---
--AAAAAGTAAACAAACAC
 C G T A C G T A G T C A A T C G C G T A G C T A A C T G A C T G C T A G A T G C C G T A C G T A G T A C C G T A C G T A C G T A A C G T A C G T A C G T
A C G T A C G T G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

FOXP1/MA0481.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AAAGAAGGGCAACAAA-
--CAAAAGTAAACAAAG
 C G T A C G T A G T C A A T C G C G T A G C T A A C T G A C T G C T A G A T G C C G T A C G T A G T A C C G T A C G T A C G T A A C G T
A C G T A C G T G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:8
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:AAAGAAGGGCAACAAA--
--------GGAACAAAGR
 C G T A C G T A G T C A A T C G C G T A G C T A A C T G A C T G C T A G A T G C C G T A C G T A G T A C C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.55
Offset:10
Orientation:reverse strand
Alignment:AAAGAAGGGCAACAAA
----------AACAAT
 C G T A C G T A G T C A A T C G C G T A G C T A A C T G A C T G C T A G A T G C C G T A C G T A G T A C C G T A C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:AAAGAAGGGCAACAAA--
--------RNAACAATGG
 C G T A C G T A G T C A A T C G C G T A G C T A A C T G A C T G C T A G A T G C C G T A C G T A G T A C C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G