Information for 7-GCCGGGCTMCCCGGAC (Motif 13)

A C T G T A G C T A G C C T A G A C T G C T A G T G A C A C G T G T A C A G T C A G T C A T G C T A C G C T A G C G T A A T G C
Reverse Opposite:
A T C G G C A T A G T C A G T C A T C G A C T G A C T G A C T G T C G A A C T G G A T C A G T C G A T C A T C G A C T G G T A C
p-value:1e-10
log p-value:-2.306e+01
Information Content per bp:1.741
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif10.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets49.4 +/- 25.7bp
Average Position of motif in Background62.0 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GCCGGGCTMCCCGGAC
------CTGCCCGCA-
 A C T G T A G C T A G C C T A G A C T G C T A G T G A C A C G T G T A C A G T C A G T C A T G C T A C G C T A G C G T A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:2
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCCGGGCTMCCCGGAC
NNNGGGGCGCCCCCNN-
 A C G T A C T G T A G C T A G C C T A G A C T G C T A G T G A C A C G T G T A C A G T C A G T C A T G C T A C G C T A G C G T A A T G C
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:GCCGGGCTMCCCGGAC-
-------TGCCCAGNHW
 A C T G T A G C T A G C C T A G A C T G C T A G T G A C A C G T G T A C A G T C A G T C A T G C T A C G C T A G C G T A A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCCGGGCTMCCCGGAC
TGCCTGCGYCMCCTT--
 A C G T A C T G T A G C T A G C C T A G A C T G C T A G T G A C A C G T G T A C A G T C A G T C A T G C T A C G C T A G C G T A A T G C
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:5
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:GCCGGGCTMCCCGGAC
-------TCCCCA---
 A C T G T A G C T A G C C T A G A C T G C T A G T G A C A C G T G T A C A G T C A G T C A T G C T A C G C T A G C G T A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GCCGGGCTMCCCGGAC
GGGGGAATCCCC----
 A C T G T A G C T A G C C T A G A C T G C T A G T G A C A C G T G T A C A G T C A G T C A T G C T A C G C T A G C G T A A T G C
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:GCCGGGCTMCCCGGAC----
------ATGCCCGGGCATGT
 A C T G T A G C T A G C C T A G A C T G C T A G T G A C A C G T G T A C A G T C A G T C A T G C T A C G C T A G C G T A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:8
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:GCCGGGCTMCCCGGAC-------
--------TCCCAGMCRAGCCCC
 A C T G T A G C T A G C C T A G A C T G C T A G T G A C A C G T G T A C A G T C A G T C A T G C T A C G C T A G C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:9
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:GCCGGGCTMCCCGGAC
---GGACCACCCACG-
 A C T G T A G C T A G C C T A G A C T G C T A G T G A C A C G T G T A C A G T C A G T C A T G C T A C G C T A G C G T A A T G C
A C G T A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T

MF0003.1_REL_class/Jaspar

Match Rank:10
Score:0.48
Offset:2
Orientation:forward strand
Alignment:GCCGGGCTMCCCGGAC
--GGGGATTTCC----
 A C T G T A G C T A G C C T A G A C T G C T A G T G A C A C G T G T A C A G T C A G T C A T G C T A C G C T A G C G T A A T G C
A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T A C G T A C G T