Information for 1-CTAAAGTCGGATT (Motif 1)

A T G C A C G T G T C A G T C A C T G A A C T G A G C T A G T C A C T G A C T G C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A C G A T G T A C A G T C A C T G C T G A A G T C A G C T A C G T A C G T G T C A A T C G
p-value:1e-14
log p-value:-3.277e+01
Information Content per bp:1.815
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.7 +/- 23.5bp
Average Position of motif in Background19.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0106.1_Arid5a_2/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTAAAGTCGGATT-----
-TNNTTTCGTATTNNANN
 A T G C A C G T G T C A G T C A C T G A A C T G A G C T A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

PH0126.1_Obox6/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CTAAAGTCGGATT----
--AAAAACGGATTATTG
 A T G C A C G T G T C A G T C A C T G A A C T G A G C T A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G

Dmbx1/MA0883.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTAAAGTCGGATT------
--TGAACCGGATTAATGAA
 A T G C A C G T G T C A G T C A C T G A A C T G A G C T A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTAAAGTCGGATT------
--TGAACCGGATTAATGAA
 A T G C A C G T G T C A G T C A C T G A A C T G A G C T A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PROX1/MA0794.1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTAAAGTCGGATT-
--CAAGACGCCTTA
 A T G C A C G T G T C A G T C A C T G A A C T G A G C T A G T C A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A

OTX1/MA0711.1/Jaspar

Match Rank:6
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:CTAAAGTCGGATT--
-------CGGATTAN
 A T G C A C G T G T C A G T C A C T G A A C T G A G C T A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A

GRHL1/MA0647.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CTAAAGTCGGATT-
--AAAACCGGTTTT
 A T G C A C G T G T C A G T C A C T G A A C T G A G C T A G T C A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T

PB0136.1_IRC900814_2/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTAAAGTCGGATT-
ATGGAAAGTCGTAAAA
 A C G T A C G T A T G C A C G T G T C A G T C A C T G A A C T G A G C T A G T C A C T G A C T G C G T A A C G T A C G T A C G T
C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A

TFCP2/MA0145.3/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CTAAAGTCGGATT
---AAACCGGTTT
 A T G C A C G T G T C A G T C A C T G A A C T G A G C T A G T C A C T G A C T G C G T A A C G T A C G T
A C G T A C G T A C G T C T G A C T G A C G T A A T G C G A T C C T A G A T C G G C A T G C A T A G C T

OTX2/MA0712.1/Jaspar

Match Rank:10
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:CTAAAGTCGGATT--
-------NGGATTAA
 A T G C A C G T G T C A G T C A C T G A A C T G A G C T A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A