Information for 3-ARAMAGYCKCKGCGGS (Motif 8)

C G T A C T G A C G T A G T C A C G T A A C T G A G T C G T A C C A T G A G T C C A T G A C T G A G T C C T A G A C T G A T G C
Reverse Opposite:
T A C G A G T C A G T C A C T G A G T C G T A C A C T G G T A C A C T G C T A G A G T C A C G T A C G T A C G T A G C T A C G T
p-value:1e-10
log p-value:-2.514e+01
Information Content per bp:1.845
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.8 +/- 24.7bp
Average Position of motif in Background33.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)2.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ARAMAGYCKCKGCGGS
AGCAACAGCCGCACC---
 A C G T A C G T C G T A C T G A C G T A G T C A C G T A A C T G A G T C G T A C C A T G A G T C C A T G A C T G A G T C C T A G A C T G A T G C
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.51
Offset:3
Orientation:forward strand
Alignment:ARAMAGYCKCKGCGGS
---AAATCACTGC---
 C G T A C T G A C G T A G T C A C G T A A C T G A G T C G T A C C A T G A G T C C A T G A C T G A G T C C T A G A C T G A T G C
A C G T A C G T A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:3
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:ARAMAGYCKCKGCGGS
----CGCAGCTGCG--
 C G T A C T G A C G T A G T C A C G T A A C T G A G T C G T A C C A T G A G T C C A T G A C T G A G T C C T A G A C T G A T G C
A C G T A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:ARAMAGYCKCKGCGGS-----
------DCHCAGCAGGRGGCC
 C G T A C T G A C G T A G T C A C G T A A C T G A G T C G T A C C A T G A G T C C A T G A C T G A G T C C T A G A C T G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

ZIC3/MA0697.1/Jaspar

Match Rank:5
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:ARAMAGYCKCKGCGGS-----
------NCGCAGCGGGGGGTC
 C G T A C T G A C G T A G T C A C G T A A C T G A G T C G T A C C A T G A G T C C A T G A C T G A G T C C T A G A C T G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:6
Score:0.49
Offset:7
Orientation:forward strand
Alignment:ARAMAGYCKCKGCGGS---
-------BTKGGCGGGAAA
 C G T A C T G A C G T A G T C A C G T A A C T G A G T C G T A C C A T G A G T C C A T G A C T G A G T C C T A G A C T G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:ARAMAGYCKCKGCGGS
------DCTCAGCAGG
 C G T A C T G A C G T A G T C A C G T A A C T G A G T C G T A C C A T G A G T C C A T G A C T G A G T C C T A G A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

ZIC4/MA0751.1/Jaspar

Match Rank:8
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:ARAMAGYCKCKGCGGS-----
------NCNCAGCGGGGGGTC
 C G T A C T G A C G T A G T C A C G T A A C T G A G T C G T A C C A T G A G T C C A T G A C T G A G T C C T A G A C T G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

E2F4/MA0470.1/Jaspar

Match Rank:9
Score:0.47
Offset:9
Orientation:forward strand
Alignment:ARAMAGYCKCKGCGGS----
---------GGGCGGGAAGG
 C G T A C T G A C G T A G T C A C G T A A C T G A G T C G T A C C A T G A G T C C A T G A C T G A G T C C T A G A C T G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

Zfx/MA0146.2/Jaspar

Match Rank:10
Score:0.47
Offset:2
Orientation:reverse strand
Alignment:ARAMAGYCKCKGCGGS
--CAGGCCNNGGCCNN
 C G T A C T G A C G T A G T C A C G T A A C T G A G T C G T A C C A T G A G T C C A T G A C T G A G T C C T A G A C T G A T G C
A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C