Information for 3-GTGGCCCTTTTGA (Motif 4)

A C T G C G A T T A C G A C T G A G T C A G T C A G T C A G C T A C G T A C G T A C G T C T A G C G T A
Reverse Opposite:
G A C T A G T C C G T A C G T A G T C A C T G A A C T G C T A G C T A G A G T C A T G C C G T A A G T C
p-value:1e-12
log p-value:-2.803e+01
Information Content per bp:1.819
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif12.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets42.2 +/- 21.1bp
Average Position of motif in Background43.8 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GTGGCCCTTTTGA
GCNGCCATCTTG-
 A C T G C G A T T A C G A C T G A G T C A G T C A G T C A G C T A C G T A C G T A C G T C T A G C G T A
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTGGCCCTTTTGA
GCCGCCATCTTG-
 A C T G C G A T T A C G A C T G A G T C A G T C A G T C A G C T A C G T A C G T A C G T C T A G C G T A
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T

Rarg/MA0859.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTGGCCCTTTTGA----
-TTGACCTTTTGACCTT
 A C T G C G A T T A C G A C T G A G T C A G T C A G T C A G C T A C G T A C G T A C G T C T A G C G T A A C G T A C G T A C G T A C G T
A C G T C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

Rarb/MA0857.1/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GTGGCCCTTTTGA-----
--TGACCTTTTGACCTTT
 A C T G C G A T T A C G A C T G A G T C A G T C A G T C A G C T A C G T A C G T A C G T C T A G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GTGGCCCTTTTGA----
--TGACCTTTTGACCTC
 A C T G C G A T T A C G A C T G A G T C A G T C A G T C A G C T A C G T A C G T A C G T C T A G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C

RARA/MA0729.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GTGGCCCTTTTGA----
CATTGACCTTTTGACCTC
 A C G T A C T G C G A T T A C G A C T G A G T C A G T C A G T C A G C T A C G T A C G T A C G T C T A G C G T A A C G T A C G T A C G T A C G T
T G A C G T C A C G A T A G C T C T A G C G T A G T A C G T A C A C G T G C A T G C A T A G C T A T C G T C G A G T A C A G T C A G C T G A T C

E2F3/MA0469.2/Jaspar

Match Rank:7
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GTGGCCCTTTTGA
AAAAATGGCGCCATTTTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T T A C G A C T G A G T C A G T C A G T C A G C T A C G T A C G T A C G T C T A G C G T A
T C G A T C G A C G T A G C T A C G T A C A G T A T C G A C T G A T G C A C T G A T G C T A G C G T C A G C A T C G A T G C A T A G C T G A C T A C G T

E2F2/MA0864.1/Jaspar

Match Rank:8
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----GTGGCCCTTTTGA
AAAATGGCGCCATTTT--
 A C G T A C G T A C G T A C G T A C G T A C T G C G A T T A C G A C T G A G T C A G T C A G T C A G C T A C G T A C G T A C G T C T A G C G T A
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C T A G C G C T A G C A T C G A T C G A T C G A T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GTGGCCCTTTTGA-
CCTTGCAATTTTTNN
 A C G T A C T G C G A T T A C G A C T G A G T C A G T C A G T C A G C T A C G T A C G T A C G T C T A G C G T A A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

TATA-Box(TBP)/Promoter/Homer

Match Rank:10
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GTGGCCCTTTTGA----
-----CCTTTTATAGNC
 A C T G C G A T T A C G A C T G A G T C A G T C A G T C A G C T A C G T A C G T A C G T C T A G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C