Information for 2-CGCCATCGCCTCT (Motif 3)

T G A C A T C G A G T C A G T C C T G A A G C T A G T C A C T G A G T C A G T C A C G T A T G C A C G T
Reverse Opposite:
C G T A A T C G G T C A C T A G T A C G A G T C A C T G T C G A A G C T A C T G A C T G T A G C A C T G
p-value:1e-12
log p-value:-2.832e+01
Information Content per bp:1.778
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.80%
Number of Background Sequences with motif61.9
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets50.1 +/- 29.2bp
Average Position of motif in Background44.5 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)-2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EGR1/MA0162.2/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGCCATCGCCTCT
CCCCCGCCCCCGCC
 A C G T T G A C A T C G A G T C A G T C C T G A A G C T A G T C A C T G A G T C A G T C A C G T A T G C A C G T
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C

PB0117.1_Eomes_2/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CGCCATCGCCTCT--
NNGGCGACACCTCNNN
 A C G T T G A C A T C G A G T C A G T C C T G A A G C T A G T C A C T G A G T C A G T C A C G T A T G C A C G T A C G T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CGCCATCGCCTCT
GTCCGCCATTA-----
 A C G T A C G T A C G T T G A C A T C G A G T C A G T C C T G A A G C T A G T C A C T G A G T C A G T C A C G T A T G C A C G T
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T A C G T A C G T A C G T

EGR4/MA0733.1/Jaspar

Match Rank:4
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CGCCATCGCCTCT
TTACGCCCACGCATTT
 A C G T A C G T A C G T T G A C A T C G A G T C A G T C C T G A A G C T A G T C A C T G A G T C A G T C A C G T A T G C A C G T
G A C T G A C T G T C A A G T C C A T G A G T C T G A C A G T C G T C A A G T C A T C G A G T C T G C A G C A T G C A T G C A T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:5
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CGCCATCGCCTCT
-ACCACATCCTGT
 T G A C A T C G A G T C A G T C C T G A A G C T A G T C A C T G A G T C A G T C A C G T A T G C A C G T
A C G T T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CGCCATCGCCTCT
GGGGCCGAGGCCTG-
 A C G T A C G T T G A C A T C G A G T C A G T C C T G A A G C T A G T C A C T G A G T C A G T C A C G T A T G C A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CGCCATCGCCTCT--
-TCCGCCCCCGCATT
 T G A C A T C G A G T C A G T C C T G A A G C T A G T C A C T G A G T C A G T C A C G T A T G C A C G T A C G T A C G T
A C G T G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CGCCATCGCCTCT--
NNNTCCATCCCATAANN
 A C G T A C G T T G A C A T C G A G T C A G T C C T G A A G C T A G T C A C T G A G T C A G T C A C G T A T G C A C G T A C G T A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CGCCATCGCCTCT
-GCCATCTGTT--
 T G A C A T C G A G T C A G T C C T G A A G C T A G T C A C T G A G T C A G T C A C G T A T G C A C G T
A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T

EGR2/MA0472.2/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CGCCATCGCCTCT
ACGCCCACGCA---
 A C G T T G A C A T C G A G T C A G T C C T G A A G C T A G T C A C T G A G T C A G T C A C G T A T G C A C G T
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A A C G T A C G T A C G T