Information for 1-YCAGCACCTCGGA (Motif 2)

A G C T A G T C C G T A A C T G G T A C G T C A A G T C A G T C A C G T A T G C A T C G A C T G C G T A
Reverse Opposite:
A C G T A G T C A T G C A T C G G T C A A C T G A C T G A C G T A C T G A G T C A C G T A C T G C T G A
p-value:1e-12
log p-value:-2.937e+01
Information Content per bp:1.856
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.9 +/- 25.1bp
Average Position of motif in Background80.5 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-YCAGCACCTCGGA-------
TTCAGCACCATGGACAGCGCC
 A C G T A G C T A G T C C G T A A C T G G T A C G T C A A G T C A G T C A C G T A T G C A T C G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:YCAGCACCTCGGA-------
TCAGCACCATGGACAGCTCC
 A G C T A G T C C G T A A C T G G T A C G T C A A G T C A G T C A C G T A T G C A T C G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

PB0117.1_Eomes_2/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---YCAGCACCTCGGA
NNGGCGACACCTCNNN
 A C G T A C G T A C G T A G C T A G T C C G T A A C T G G T A C G T C A A G T C A G T C A C G T A T G C A T C G A C T G C G T A
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----YCAGCACCTCGGA
TGAGTCAGCA-------
 A C G T A C G T A C G T A C G T A G C T A G T C C G T A A C T G G T A C G T C A A G T C A G T C A C G T A T G C A T C G A C T G C G T A
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:YCAGCACCTCGGA
--AACACCTGCT-
 A G C T A G T C C G T A A C T G G T A C G T C A A G T C A G T C A C G T A T G C A T C G A C T G C G T A
A C G T A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:YCAGCACCTCGGA
--CGCACCTGCT-
 A G C T A G T C C G T A A C T G G T A C G T C A A G T C A G T C A C G T A T G C A T C G A C T G C G T A
A C G T A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--YCAGCACCTCGGA--
NNTNCGCACCTGTNGAN
 A C G T A C G T A G C T A G T C C G T A A C T G G T A C G T C A A G T C A G T C A C G T A T G C A T C G A C T G C G T A A C G T A C G T
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T

NRL/MA0842.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-YCAGCACCTCGGA
GTCAGCANNTN---
 A C G T A G C T A G T C C G T A A C T G G T A C G T C A A G T C A G T C A C G T A T G C A T C G A C T G C G T A
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:9
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----YCAGCACCTCGGA
SCTGTCARCACC-----
 A C G T A C G T A C G T A C G T A G C T A G T C C G T A A C T G G T A C G T C A A G T C A G T C A C G T A T G C A T C G A C T G C G T A
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--YCAGCACCTCGGA
NGTCAGCANTTT---
 A C G T A C G T A G C T A G T C C G T A A C T G G T A C G T C A A G T C A G T C A C G T A T G C A T C G A C T G C G T A
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T A C G T A C G T