Information for 7-CTCCAGGTCC (Motif 17)

T G A C A C G T A G T C A T G C C G T A A T C G A C T G A G C T G T A C G T A C
Reverse Opposite:
A C T G C A T G C T G A G T A C A T G C A C G T A T C G T C A G G T C A A C T G
p-value:1e-8
log p-value:-1.858e+01
Information Content per bp:1.774
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.51%
Number of Background Sequences with motif257.4
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets45.7 +/- 26.3bp
Average Position of motif in Background47.9 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTCCAGGTCC
GGCTCYAKCAYC
 A C G T A C G T T G A C A C G T A G T C A T G C C G T A A T C G A C T G A G C T G T A C G T A C
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTCCAGGTCC-----
ATCCACAGGTGCGAAAA
 A C G T A C G T T G A C A C G T A G T C A T G C C G T A A T C G A C T G A G C T G T A C G T A C A C G T A C G T A C G T A C G T A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

GFY(?)/Promoter/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTCCAGGTCC-
ACTACAATTCCC
 A C G T T G A C A C G T A G T C A T G C C G T A A T C G A C T G A G C T G T A C G T A C A C G T
T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CTCCAGGTCC--
--VCAGGTRDRY
 T G A C A C G T A G T C A T G C C G T A A T C G A C T G A G C T G T A C G T A C A C G T A C G T
A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

TCF4/MA0830.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTCCAGGTCC-
-NNCAGGTGCG
 T G A C A C G T A G T C A T G C C G T A A T C G A C T G A G C T G T A C G T A C A C G T
A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTCCAGGTCC
NTCAAGGTCA
 T G A C A C G T A G T C A T G C C G T A A T C G A C T G A G C T G T A C G T A C
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CTCCAGGTCC-------
---CAGGCCNNGGCCNN
 T G A C A C G T A G T C A T G C C G T A A T C G A C T G A G C T G T A C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ELK1/MA0028.2/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTCCAGGTCC
NACTTCCGGT--
 A C G T A C G T T G A C A C G T A G T C A T G C C G T A A T C G A C T G A G C T G T A C G T A C
G A T C T C G A A G T C C G A T A C G T T G A C T G A C A C T G A T C G G A C T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTCCAGGTCC-
-NNCAGGTGNN
 T G A C A C G T A G T C A T G C C G T A A T C G A C T G A G C T G T A C G T A C A C G T
A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTCCAGGTCC
--CTAGGCCT
 T G A C A C G T A G T C A T G C C G T A A T C G A C T G A G C T G T A C G T A C
A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T