Information for 5-GCTAAAGCCA (Motif 11)

C T A G G T A C G C A T T C G A T C G A T C G A C A T G A T G C T G A C G T C A
Reverse Opposite:
C A G T A C T G T A C G G T A C A G C T A G C T A G C T C G T A C A T G G A T C
p-value:1e-9
log p-value:-2.213e+01
Information Content per bp:1.657
Number of Target Sequences with motif64.0
Percentage of Target Sequences with motif7.66%
Number of Background Sequences with motif1553.5
Percentage of Background Sequences with motif3.19%
Average Position of motif in Targets47.4 +/- 26.5bp
Average Position of motif in Background49.0 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCTAAAGCCA-
--AAAAGTCAA
 C T A G G T A C G C A T T C G A T C G A T C G A C A T G A T G C T G A C G T C A A C G T
A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCTAAAGCCA
GRTGMTRGAGCC-
 A C G T A C G T A C G T C T A G G T A C G C A T T C G A T C G A T C G A C A T G A T G C T G A C G T C A
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GCTAAAGCCA-
-----TGCCAA
 C T A G G T A C G C A T T C G A T C G A T C G A C A T G A T G C T G A C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCTAAAGCCA--
---CGTGCCAAG
 C T A G G T A C G C A T T C G A T C G A T C G A C A T G A T G C T G A C G T C A A C G T A C G T
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCTAAAGCCA-----
TGCCAAAATAAACANN
 A C G T C T A G G T A C G C A T T C G A T C G A T C G A C A T G A T G C T G A C G T C A A C G T A C G T A C G T A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCTAAAGCCA
GCCACACCCA
 C T A G G T A C G C A T T C G A T C G A T C G A C A T G A T G C T G A C G T C A
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GCTAAAGCCA-
-CAAAGGTCAG
 C T A G G T A C G C A T T C G A T C G A T C G A C A T G A T G C T G A C G T C A A C G T
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GCTAAAGCCA
----CAGCC-
 C T A G G T A C G C A T T C G A T C G A T C G A C A T G A T G C T G A C G T C A
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCTAAAGCCA-
CNGTCACGCCAC
 A C G T C T A G G T A C G C A T T C G A T C G A T C G A C A T G A T G C T G A C G T C A A C G T
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C

RHOXF1/MA0719.1/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GCTAAAGCCA
--ATAATCCC
 C T A G G T A C G C A T T C G A T C G A T C G A C A T G A T G C T G A C G T C A
A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C