Information for 14-RTRWTTKTWGAAG (Motif 20)

C T G A A C G T T C A G C G T A A G C T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T G T A C C G A T C G T A G T C A C G T A C T G A C G A T A G C T C G T A A G C T
p-value:1e-6
log p-value:-1.401e+01
Information Content per bp:1.822
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.37%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.0 +/- 11.0bp
Average Position of motif in Background52.5 +/- 18.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.61
Offset:8
Orientation:reverse strand
Alignment:RTRWTTKTWGAAG-
--------NGAAGC
 C T G A A C G T T C A G C G T A A G C T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

MEF2A/MA0052.3/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-RTRWTTKTWGAAG
TCTATTTTTAGA--
 A C G T C T G A A C G T T C A G C G T A A G C T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G
C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A A C G T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:RTRWTTKTWGAAG----
-NAATTTTACGAGNTNN
 C T G A A C G T T C A G C G T A A G C T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

PB0116.1_Elf3_2/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----RTRWTTKTWGAAG
GNATTTTTTTTTTGANC
 A C G T A C G T A C G T A C G T C T G A A C G T T C A G C G T A A G C T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G
C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C

MEF2D/MA0773.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-RTRWTTKTWGAAG
TCTATTTATAGN--
 A C G T C T G A A C G T T C A G C G T A A G C T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:RTRWTTKTWGAAG-
---NTTTTACGAGN
 C T G A A C G T T C A G C G T A A G C T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G A C G T
A C G T A C G T A C G T C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

MEF2C/MA0497.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--RTRWTTKTWGAAG
TTCTATTTTTAGNNN
 A C G T A C G T C T G A A C G T T C A G C G T A A G C T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:RTRWTTKTWGAAG--
-TTTTTTTTCNNGTN
 C T G A A C G T T C A G C G T A A G C T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G A C G T A C G T
A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

PH0048.1_Hoxa13/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:RTRWTTKTWGAAG----
-ANATTTTACGAGNNNN
 C T G A A C G T T C A G C G T A A G C T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-RTRWTTKTWGAAG
KCTATTTTTRGH--
 A C G T C T G A A C G T T C A G C G T A A G C T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C A C G T A C G T